C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 2700029M09 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136098 2700029M09Rik-004 ENSMUSG00000038005 10090 + 8:60890451-60905985 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000136098
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000136098 0.249±0.00 0.475±0.15 3.108±0.00 0.758±0.35 0.538±0.20 0.997±0.28 0.658±0.05 0.830±0.00 0.887±0.00 0.957±0.00 0.482±0.25 2.910±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393381 C4orf27-001 protein_coding Homo_sapiens 0 375
ENST00000502889 RP11-54D18.2-001 unprocessed_pseudogene Homo_sapiens 0 320
ENST00000506125 C4orf27-002 retained_intron Homo_sapiens 0 257
ENST00000515204 C4orf27-003 retained_intron Homo_sapiens 0 222

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