C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA methyltransferase like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038046 Rnmtl1 10090 + 11:76243715-76250619 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040577 Rnmtl1-001 76243715-76250619 protein_coding
  ENSMUST00000125463 Rnmtl1-002 76243736-76244884 retained_intron
  ENSMUST00000155526 Rnmtl1-003 76249212-76250508 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalHeartLiverMuscleOvaryENSMUST00000040577ENSMUST00000125463
Transcript ID Adrenal Heart Liver Muscle Ovary
ENSMUST00000040577 8.228±0.64 8.987±1.95 8.579±3.18 7.600±1.44 7.873±0.00
ENSMUST00000125463 19.693±4.16 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AF CIL_0006AF_0003 CGP 11:76243715-76399140

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001510 IEA RNA methylation
GO:0005739 IDA mitochondrion
GO:0006396 IEA RNA processing
GO:0008150 ND biological_process
GO:0008173 IEA RNA methyltransferase activity
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016543 rnmtl1a RNA methyltransferase like 1a protein_coding Danio_rerio
ENSDARG00000069082 rnmtl1b RNA methyltransferase like 1b protein_coding Danio_rerio
ENSG00000171861 RNMTL1 RNA methyltransferase like 1 protein_coding Homo_sapiens

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