C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA methyltransferase like 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040577 Rnmtl1-001 ENSMUSG00000038046 10090 + 11:76243715-76250619 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalHeartLiverMuscleOvaryENSMUST00000040577
Transcript ID Adrenal Heart Liver Muscle Ovary
ENSMUST00000040577 8.228±0.64 8.987±1.95 8.579±3.18 7.600±1.44 7.873±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AF CIL_0006AF_0003 CGP 11:76243715-76399140

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001510 IEA RNA methylation
GO:0005739 IDA mitochondrion
GO:0006396 IEA RNA processing
GO:0008150 ND biological_process
GO:0008173 IEA RNA methyltransferase activity
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304478 RNMTL1-001 protein_coding Homo_sapiens 0 1249
ENST00000454810 RNMTL1P2-001 processed_pseudogene Homo_sapiens 0 756
ENST00000536578 GLOD4-201 protein_coding Homo_sapiens 0 501
ENST00000571157 RNMTL1-003 protein_coding Homo_sapiens 0 632
ENST00000574509 RNMTL1-004 nonsense_mediated_decay Homo_sapiens 0 464
ENST00000574916 RNMTL1-002 retained_intron Homo_sapiens 0 542

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