C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006AF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000016543-ENSDARG00000033978 CGP 7955 15:15204133-15342765
GeneTranscriptPositionBiotype
ENSDARG00000016543 (rnmtl1a)
RNA methyltransferase like 1a 		ENSDART00000147900 (rnmtl1a-001) 15204133-15211223 protein_coding
ENSDARG00000033978 (nxn)
nucleoredoxin 		ENSDART00000028500 (nxn-001) 15212824-15342765 protein_coding
CIL_0006AF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171861-ENSG00000167693 CGP 9606 17:782273-979770
GeneTranscriptPositionBiotype
ENSG00000167693 (NXN)
nucleoredoxin 		ENST00000336868 (NXN-001) 799313-979770 protein_coding
ENST00000537628 (NXN-002) 800768-864097 protein_coding
ENST00000571080 (NXN-012) 978299-979462 retained_intron
ENST00000571281 (NXN-007) 800388-803984 retained_intron
ENST00000571338 (NXN-009) 823687-930051 processed_transcript
ENST00000571684 (NXN-003) 800481-826001 protein_coding
ENST00000574018 (NXN-008) 800788-805248 processed_transcript
ENST00000575171 (NXN-006) 825566-979349 retained_intron
ENST00000575455 (NXN-004) 819114-897014 retained_intron
ENST00000575801 (NXN-005) 799313-864111 protein_coding
ENST00000576991 (NXN-011) 929956-933413 processed_transcript
ENST00000577098 (NXN-010) 823646-908034 processed_transcript
ENSG00000167699 (GLOD4)
glyoxalase domain containing 4 		ENST00000301328 (GLOD4-005) 759330-782279 protein_coding
ENST00000301329 (GLOD4-001) 759097-782341 protein_coding
ENST00000536578 (GLOD4-201) 759310-783390 protein_coding
ENST00000571073 (GLOD4-002) 759323-777692 retained_intron
ENST00000572220 (GLOD4-016) 771451-782276 nonsense_mediated_decay
ENST00000573137 (GLOD4-007) 760073-771404 protein_coding
ENST00000574354 (GLOD4-012) 778302-782280 retained_intron
ENST00000574554 (GLOD4-004) 760022-782267 nonsense_mediated_decay
ENST00000574581 (GLOD4-017) 770429-782255 nonsense_mediated_decay
ENST00000575528 (GLOD4-009) 760064-771379 nonsense_mediated_decay
ENST00000575790 (GLOD4-014) 770044-782291 nonsense_mediated_decay
ENST00000575800 (GLOD4-010) 757097-760161 processed_transcript
ENST00000575851 (GLOD4-015) 760098-782280 nonsense_mediated_decay
ENST00000576239 (GLOD4-003) 759452-782294 retained_intron
ENST00000576419 (GLOD4-008) 760188-782279 protein_coding
ENST00000576670 (GLOD4-011) 776881-782193 nonsense_mediated_decay
ENST00000576750 (GLOD4-013) 778423-782280 retained_intron
ENSG00000171861 (RNMTL1)
RNA methyltransferase like 1 		ENST00000304478 (RNMTL1-001) 782273-792509 protein_coding
ENST00000571157 (RNMTL1-003) 782600-788198 protein_coding
ENST00000574509 (RNMTL1-004) 782367-791766 nonsense_mediated_decay
ENST00000574916 (RNMTL1-002) 782358-783517 retained_intron
ENSG00000262003 (RP11-676J12.7)
 ENST00000576252 (RP11-676J12.7-001) 909632-911212 antisense
ENSG00000262133 (RP11-676J12.6)
 ENST00000573877 (RP11-676J12.6-001) 877902-880093 antisense
ENSG00000262434 (RP11-676J12.8)
 ENST00000574560 (RP11-676J12.8-001) 789744-790525 antisense
ENSG00000263017 (RP11-356I18.1)
 ENST00000570544 (RP11-356I18.1-001) 959034-959366 processed_pseudogene
ENSG00000277491 (RP11-676J12.9)
 ENST00000612517 (RP11-676J12.9-001) 795306-795794 lincRNA
CIL_0006AF_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038046-ENSMUSG00000020844 CGP 10090 11:76243715-76399140
GeneTranscriptPositionBiotype
ENSMUSG00000017286 (Glod4)
glyoxalase domain containing 4 		ENSMUST00000017430 (Glod4-001) 76221510-76243725 protein_coding
ENSMUST00000164022 (Glod4-007) 76233244-76243610 protein_coding
ENSMUST00000167883 (Glod4-009) 76234247-76239572 retained_intron
ENSMUST00000168055 (Glod4-008) 76237713-76243638 protein_coding
ENSMUST00000169532 (Glod4-003) 76120987-76243675 retained_intron
ENSMUST00000169701 (Glod4-002) 76210571-76243663 protein_coding
ENSMUST00000170017 (Glod4-005) 76221607-76243651 nonsense_mediated_decay
ENSMUST00000170590 (Glod4-006) 76234519-76243669 nonsense_mediated_decay
ENSMUST00000170710 (Glod4-004) 76221794-76243459 protein_coding
ENSMUSG00000020844 (Nxn)
nucleoredoxin 		ENSMUST00000021204 (Nxn-001) 76257198-76399140 protein_coding
ENSMUST00000131472 (Nxn-002) 76358803-76399068 processed_transcript
ENSMUSG00000038046 (Rnmtl1)
RNA methyltransferase like 1 		ENSMUST00000040577 (Rnmtl1-001) 76243715-76250619 protein_coding
ENSMUST00000125463 (Rnmtl1-002) 76243736-76244884 retained_intron
ENSMUST00000155526 (Rnmtl1-003) 76249212-76250508 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006AF_0001ENSDARG00000016543ENSDART00000147900ENSDARG00000033978ENSDART00000028500CIL_0006AF_0002ENSG00000167693ENST00000336868ENST00000537628ENST00000571080ENST00000571281ENST00000571338ENST00000571684ENST00000574018ENST00000575171ENST00000575455ENST00000575801ENST00000576991ENST00000577098ENSG00000167699ENST00000301328ENST00000301329ENST00000536578ENST00000571073ENST00000572220ENST00000573137ENST00000574354ENST00000574554ENST00000574581ENST00000575528ENST00000575790ENST00000575800ENST00000575851ENST00000576239ENST00000576419ENST00000576670ENST00000576750ENSG00000171861ENST00000304478ENST00000571157ENST00000574509ENST00000574916ENSG00000262003ENST00000576252ENSG00000262133ENST00000573877ENSG00000262434ENST00000574560ENSG00000263017ENST00000570544ENSG00000277491ENST00000612517CIL_0006AF_0003ENSMUSG00000017286ENSMUST00000017430ENSMUST00000164022ENSMUST00000167883ENSMUST00000168055ENSMUST00000169532ENSMUST00000169701ENSMUST00000170017ENSMUST00000170590ENSMUST00000170710ENSMUSG00000020844ENSMUST00000021204ENSMUST00000131472ENSMUSG00000038046ENSMUST00000040577ENSMUST00000125463ENSMUST00000155526
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006AF_0001ENSDARG00000016543ENSDART00000147900ENSDARG00000033978ENSDART00000028500CIL_0006AF_0002ENSG00000167693ENST00000336868ENST00000537628ENST00000571684ENST00000575455ENST00000575801ENSG00000167699ENST00000301328ENST00000301329ENST00000536578ENST00000571073ENST00000574554ENST00000575528ENST00000575851ENST00000576239ENST00000576419ENSG00000171861ENST00000304478ENST00000574509ENST00000574916ENSG00000262003ENST00000576252ENSG00000262133ENST00000573877ENSG00000262434ENST00000574560ENSG00000263017ENST00000570544ENSG00000277491ENST00000612517CIL_0006AF_0003ENSMUSG00000017286ENSMUST00000017430ENSMUST00000169701ENSMUST00000170017ENSMUSG00000020844ENSMUST00000021204ENSMUST00000131472ENSMUSG00000038046ENSMUST00000040577ENSMUST00000125463
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000016543 ENSDART00000147900 N/A N/A N/A 1.633±0.05 N/A N/A 1.447±0.18 2.246±1.64 1.240±0.00 N/A 0.571±0.00 N/A N/A N/A
ENSDARG00000033978 ENSDART00000028500 N/A N/A N/A 11.214±2.07 N/A N/A 3.679±2.54 1.872±0.39 0.181±0.00 N/A 3.540±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167693 ENST00000336868 13.497±0.00 9.765±0.00 N/A 1.665±1.24 3.633±2.76 13.379±12.40 3.941±0.00 4.460±0.00 4.386±0.00 7.882±6.46 37.671±33.06 10.416±8.48 14.266±2.05 5.354±3.30
ENST00000537628 N/A N/A N/A N/A N/A N/A N/A 1.777±0.00 N/A N/A N/A 0.684±0.00 N/A N/A
ENST00000571080 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571684 N/A N/A N/A 1.954±0.00 3.996±0.00 0.841±0.00 1.705±0.00 N/A 4.068±0.00 N/A N/A N/A N/A N/A
ENST00000574018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575455 N/A N/A N/A 0.912±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575801 N/A N/A N/A N/A 1.882±0.61 15.311±0.00 0.804±0.00 N/A 3.190±0.00 0.812±0.00 1.778±0.00 4.839±1.45 2.185±0.16 6.400±3.36
ENST00000576991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000167699 ENST00000301328 5.913±0.00 18.913±0.00 N/A 18.885±0.00 N/A 13.098±0.00 6.724±0.00 16.081±0.00 11.414±0.00 7.817±0.00 5.097±0.00 13.219±2.89 20.302±2.82 11.767±1.64
ENST00000301329 N/A N/A 1.306±0.00 5.991±0.00 N/A 3.055±0.00 1.096±0.00 4.939±0.00 3.808±0.00 3.131±0.00 N/A 4.146±0.00 10.941±0.00 N/A
ENST00000536578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.102±0.00 N/A 5.902±0.00
ENST00000571073 N/A N/A 1.030±0.00 N/A 3.017±0.00 1.538±0.00 N/A N/A 1.390±0.00 N/A 2.601±0.00 2.591±0.00 N/A N/A
ENST00000572220 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.151±0.00 N/A N/A
ENST00000574581 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.589±0.00 24.274±0.00 N/A
ENST00000575790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575851 5.700±0.00 13.145±0.00 N/A N/A 10.077±0.00 N/A N/A 5.326±0.00 N/A N/A N/A N/A N/A N/A
ENST00000576239 N/A N/A 0.564±0.00 N/A 1.123±0.00 1.408±0.00 N/A N/A N/A 1.019±0.00 N/A N/A N/A N/A
ENST00000576419 N/A N/A 4.738±0.00 5.907±0.00 8.440±0.00 N/A 2.883±0.00 3.910±0.00 5.300±0.00 5.996±0.00 N/A 12.449±6.74 14.318±3.33 N/A
ENST00000576670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171861 ENST00000304478 5.590±0.00 N/A N/A N/A 11.118±0.00 5.231±2.51 5.419±4.20 9.922±0.00 5.892±4.44 5.635±0.00 8.755±0.00 7.837±4.50 9.170±1.30 16.910±0.20
ENST00000571157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.104±0.00 N/A N/A N/A
ENST00000574916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.554±0.00 N/A N/A N/A
ENSG00000262003 ENST00000576252 2.392±0.00 0.664±0.00 0.332±0.00 0.199±0.09 0.636±0.41 0.524±0.32 0.137±0.06 0.120±0.04 6.042±0.00 0.618±0.47 0.118±0.00 0.164±0.10 0.464±0.17 0.738±0.20
ENSG00000262133 ENST00000573877 0.202±0.00 0.031±0.00 N/A 0.034±0.00 0.264±0.00 N/A N/A N/A N/A 1.149±0.00 N/A 0.045±0.00 0.412±0.19 0.574±0.18
ENSG00000262434 ENST00000574560 0.073±0.00 0.132±0.00 N/A N/A 0.202±0.00 0.036±0.00 0.108±0.07 0.198±0.00 N/A 0.369±0.00 N/A 0.277±0.18 0.138±0.01 0.262±0.11
ENSG00000263017 ENST00000570544 N/A 0.361±0.00 N/A N/A N/A N/A 0.174±0.00 N/A N/A 0.534±0.35 N/A 0.233±0.00 N/A N/A
ENSG00000277491 ENST00000612517 0.499±0.00 0.473±0.00 N/A 0.223±0.00 0.505±0.44 0.297±0.00 0.335±0.00 N/A 0.405±0.00 0.407±0.29 N/A 0.314±0.00 0.537±0.18 0.559±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017286 ENSMUST00000017430 N/A N/A 18.743±0.23 17.733±0.00 N/A N/A 12.605±0.00 N/A 17.461±5.70 N/A 6.834±2.53 22.094±5.63 17.580±4.12 N/A
ENSMUST00000164022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167883 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169701 N/A 3.646±0.76 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.320±1.40 8.770±0.00 N/A
ENSMUST00000170017 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 22.671±3.08 N/A N/A
ENSMUST00000170590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170710 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000020844 ENSMUST00000021204 15.025±8.62 11.421±0.25 20.568±0.38 6.114±3.23 9.831±3.27 8.850±0.58 4.678±0.14 4.745±0.18 1.319±0.79 9.224±0.09 16.828±0.74 22.434±4.44 2.838±1.15 37.288±10.75
ENSMUST00000131472 N/A 9.708±2.97 N/A N/A N/A N/A N/A N/A 0.247±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000038046 ENSMUST00000040577 N/A 8.228±0.64 N/A N/A N/A N/A 8.987±1.95 N/A 8.579±3.18 N/A 7.600±1.44 7.873±0.00 N/A N/A
ENSMUST00000125463 N/A 19.693±4.16 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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