C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038072 Galnt11 10090 + 5:25222882-25265918 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045737 Galnt11-001 25222882-25265918 protein_coding
  ENSMUST00000114950 Galnt11-003 25247363-25265918 protein_coding
  ENSMUST00000114952 Galnt11-002 25246373-25265917 protein_coding
  ENSMUST00000144971 Galnt11-004 25246783-25248917 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045737ENSMUST00000114950ENSMUST00000114952
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045737 7.166±3.26 9.520±1.61 9.957±1.48 5.707±3.48 7.650±0.76 7.626±2.32 6.261±1.24 N/A 2.716±1.30 8.649±0.92 4.099±0.38 5.518±2.60 4.680±2.03 2.208±0.56
ENSMUST00000114950 N/A 2.095±0.25 2.644±0.41 4.455±0.47 2.004±0.00 2.165±0.54 1.357±0.00 198.105±37.60 3.315±1.43 N/A N/A 4.409±2.30 8.858±1.36 0.313±0.00
ENSMUST00000114952 1.740±0.00 N/A N/A 13.293±0.00 9.219±0.00 N/A N/A N/A 1.156±0.42 N/A 2.365±1.49 6.175±2.92 6.870±2.24 1.340±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T7 CIL_0007T7_0002 VISTA 5:24699254-25303507
CIL_0007T1 CIL_0007T1_0002 VISTA 5:24708595-25311977
CIL_00027A CIL_00027A_0002 CGP 5:25222882-25498783

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004653 ISS polypeptide N-acetylgalactosaminyltransferase activity
GO:0005112 ISS Notch binding
GO:0005575 ND cellular_component
GO:0005794 IEA Golgi apparatus
GO:0007220 ISS Notch receptor processing
GO:0007368 ISS determination of left/right symmetry
GO:0008593 ISS regulation of Notch signaling pathway
GO:0016021 IEA integral component of membrane
GO:0018243 ISS protein O-linked glycosylation via threonine
GO:0030246 IEA carbohydrate binding
GO:0046872 IEA metal ion binding
GO:0060271 ISS cilium morphogenesis
GO:0061314 ISS Notch signaling involved in heart development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063636 galnt11 UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) protein_coding Danio_rerio
ENSG00000178234 GALNT11 polypeptide N-acetylgalactosaminyltransferase 11 protein_coding Homo_sapiens

Loading