C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00027A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000178234-ENSG00000055609 CGP 9606 7:152025674-152436005
GeneTranscriptPositionBiotype
ENSG00000055609 (KMT2C)
lysine (K)-specific methyltransferase 2C 		ENST00000262189 (KMT2C-001) 152134925-152436005 protein_coding
ENST00000355193 (KMT2C-201) 152134929-152436005 protein_coding
ENST00000360104 (KMT2C-009) 152134922-152177968 protein_coding
ENST00000418061 (KMT2C-015) 152152899-152162164 protein_coding
ENST00000418673 (KMT2C-008) 152224122-152248019 protein_coding
ENST00000424877 (KMT2C-010) 152135533-152163334 protein_coding
ENST00000452749 (KMT2C-013) 152315265-152435799 protein_coding
ENST00000473186 (KMT2C-002) 152136584-152239069 retained_intron
ENST00000485241 (KMT2C-016) 152152889-152155005 processed_transcript
ENST00000489110 (KMT2C-014) 152220042-152222067 retained_intron
ENST00000490130 (KMT2C-003) 152309934-152312296 retained_intron
ENST00000558084 (KMT2C-018) 152134925-152436005 nonsense_mediated_decay
ENST00000558665 (KMT2C-017) 152177829-152182219 protein_coding
ENSG00000213188 (YBX1P4)
Y box binding protein 1 pseudogene 4 		ENST00000392794 (YBX1P4-001) 152128879-152129686 processed_pseudogene
ENSG00000241007 (SEPT7P6)
septin 7 pseudogene 6 		ENST00000469999 (SEPT7P6-001) 152367519-152368661 processed_pseudogene
ENSG00000253088 (Y_RNA)
Y RNA 		ENST00000517279 (Y_RNA.1-926) 152402780-152402893 misc_RNA
ENSG00000270405 (RP11-208G20.3)
 ENST00000603054 (RP11-208G20.3-001) 152366763-152367015 processed_pseudogene
CIL_00027A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038072-ENSMUSG00000038056 CGP 10090 5:25222882-25498783
GeneTranscriptPositionBiotype
ENSMUSG00000038056 (Kmt2c)
lysine (K)-specific methyltransferase 2C 		ENSMUST00000045291 (Kmt2c-001) 25273609-25498745 protein_coding
ENSMUST00000172556 (Kmt2c-008) 25272426-25308550 protein_coding
ENSMUST00000172626 (Kmt2c-005) 25382632-25498783 retained_intron
ENSMUST00000172707 (Kmt2c-009) 25275651-25281400 retained_intron
ENSMUST00000173073 (Kmt2c-007) 25315737-25498702 protein_coding
ENSMUST00000173174 (Kmt2c-003) 25372836-25498755 protein_coding
ENSMUST00000173673 (Kmt2c-010) 25289120-25293379 retained_intron
ENSMUST00000174734 (Kmt2c-006) 25271798-25300075 protein_coding
ENSMUSG00000038072 (Galnt11)
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 		ENSMUST00000045737 (Galnt11-001) 25222882-25265918 protein_coding
ENSMUST00000114950 (Galnt11-003) 25247363-25265918 protein_coding
ENSMUST00000114952 (Galnt11-002) 25246373-25265917 protein_coding
ENSMUST00000144971 (Galnt11-004) 25246783-25248917 protein_coding
ENSMUSG00000054116 (E130116L18Rik)
RIKEN cDNA E130116L18 gene 		ENSMUST00000066954 (E130116L18Rik-201) 25222848-25223153 protein_coding
ENSMUSG00000092181 (Gm20432)
predicted gene 20432 		ENSMUST00000173716 (Gm20432-001) 25433036-25433285 processed_pseudogene
ENSMUSG00000092344 (Hspe1-ps3)
heat shock protein 1 (chaperonin 10), pseudogene 3 		ENSMUST00000172726 (Hspe1-ps3-001) 25391608-25391884 processed_pseudogene
ENSMUSG00000092510 (Gm18343)
predicted gene, 18343 		ENSMUST00000172802 (Gm18343-001) 25450305-25450908 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00027A_0001ENSG00000055609ENST00000262189ENST00000355193ENST00000360104ENST00000418061ENST00000418673ENST00000424877ENST00000452749ENST00000473186ENST00000485241ENST00000489110ENST00000490130ENST00000558084ENST00000558665ENSG00000213188ENST00000392794ENSG00000241007ENST00000469999ENSG00000253088ENST00000517279ENSG00000270405ENST00000603054CIL_00027A_0002ENSMUSG00000038056ENSMUST00000045291ENSMUST00000172556ENSMUST00000172626ENSMUST00000172707ENSMUST00000173073ENSMUST00000173174ENSMUST00000173673ENSMUST00000174734ENSMUSG00000038072ENSMUST00000045737ENSMUST00000114950ENSMUST00000114952ENSMUST00000144971ENSMUSG00000054116ENSMUST00000066954ENSMUSG00000092181ENSMUST00000173716ENSMUSG00000092344ENSMUST00000172726ENSMUSG00000092510ENSMUST00000172802
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00027A_0001ENSG00000055609ENST00000262189ENST00000355193ENST00000360104ENST00000424877ENST00000473186ENSG00000213188ENST00000392794ENSG00000241007ENST00000469999ENSG00000253088ENST00000517279ENSG00000270405ENST00000603054CIL_00027A_0002ENSMUSG00000038056ENSMUST00000045291ENSMUST00000172556ENSMUST00000173073ENSMUST00000174734ENSMUSG00000038072ENSMUST00000045737ENSMUST00000114950ENSMUST00000114952ENSMUSG00000054116ENSMUST00000066954ENSMUSG00000092181ENSMUST00000173716ENSMUSG00000092344ENSMUST00000172726ENSMUSG00000092510ENSMUST00000172802
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000055609 ENST00000262189 0.522±0.00 N/A 1.234±0.00 4.941±0.00 2.206±0.00 3.936±0.00 0.690±0.00 0.524±0.00 2.896±0.00 N/A N/A 2.535±0.00 N/A N/A
ENST00000355193 0.559±0.00 N/A 1.244±0.00 N/A 2.218±0.00 5.946±0.00 0.695±0.00 0.577±0.00 2.909±0.00 1.699±0.85 N/A 1.224±0.94 0.317±0.00 N/A
ENST00000360104 0.884±0.00 1.776±0.00 N/A 1.226±0.00 1.302±0.00 N/A 0.763±0.00 0.943±0.00 N/A 0.787±0.00 N/A 1.425±0.04 0.408±0.06 1.822±0.52
ENST00000418061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000418673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000424877 2.429±0.00 N/A N/A 1.362±0.00 1.528±0.00 N/A N/A 1.334±0.00 0.514±0.00 2.235±0.00 3.599±0.00 3.021±0.66 7.073±0.00 5.400±0.00
ENST00000452749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473186 N/A N/A N/A N/A N/A N/A 1.320±0.00 N/A N/A 3.750±0.00 2.092±0.00 2.796±0.00 N/A N/A
ENST00000485241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490130 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558084 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000213188 ENST00000392794 0.117±0.00 1.397±0.00 0.139±0.00 0.107±0.00 0.112±0.01 N/A 0.132±0.00 0.401±0.00 0.130±0.00 0.050±0.00 0.243±0.00 0.338±0.20 0.123±0.00 0.324±0.16
ENSG00000241007 ENST00000469999 0.043±0.00 0.070±0.00 0.062±0.00 0.040±0.02 0.602±0.59 0.240±0.22 0.051±0.02 N/A 0.326±0.00 N/A 0.607±0.00 0.053±0.03 0.022±0.00 0.031±0.00
ENSG00000253088 ENST00000517279 N/A N/A N/A 0.499±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.473±0.00 1.336±0.00
ENSG00000270405 ENST00000603054 N/A N/A N/A N/A N/A N/A 0.263±0.00 N/A N/A N/A N/A N/A 0.555±0.00 0.248±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038056 ENSMUST00000045291 1.428±0.52 1.180±0.44 N/A 2.493±0.00 1.606±0.61 1.735±0.62 0.889±0.00 1.096±0.00 0.286±0.05 2.002±0.17 N/A 3.194±1.64 3.154±1.45 0.729±0.21
ENSMUST00000172556 3.832±0.75 4.189±0.84 3.443±0.10 6.235±2.86 5.556±0.65 4.627±0.32 2.312±0.44 3.053±0.40 1.540±0.42 5.090±0.61 1.138±0.00 4.438±1.00 2.779±0.52 1.661±0.10
ENSMUST00000172626 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.587±0.00
ENSMUST00000173174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174734 N/A N/A 3.420±0.34 3.386±1.71 N/A N/A N/A N/A 0.852±0.38 N/A 1.094±0.17 2.601±0.51 3.081±0.47 0.835±0.00
ENSMUSG00000038072 ENSMUST00000045737 7.166±3.26 9.520±1.61 9.957±1.48 5.707±3.48 7.650±0.76 7.626±2.32 6.261±1.24 N/A 2.716±1.30 8.649±0.92 4.099±0.38 5.518±2.60 4.680±2.03 2.208±0.56
ENSMUST00000114950 N/A 2.095±0.25 2.644±0.41 4.455±0.47 2.004±0.00 2.165±0.54 1.357±0.00 198.105±37.60 3.315±1.43 N/A N/A 4.409±2.30 8.858±1.36 0.313±0.00
ENSMUST00000114952 1.740±0.00 N/A N/A 13.293±0.00 9.219±0.00 N/A N/A N/A 1.156±0.42 N/A 2.365±1.49 6.175±2.92 6.870±2.24 1.340±0.00
ENSMUST00000144971 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000054116 ENSMUST00000066954 N/A 7.171±0.95 N/A N/A 9.216±0.35 N/A N/A N/A N/A N/A N/A 13.195±5.50 N/A N/A
ENSMUSG00000092181 ENSMUST00000173716 N/A N/A 0.195±0.00 0.134±0.00 N/A N/A N/A 0.974±0.00 0.337±0.23 N/A N/A N/A 0.583±0.26 N/A
ENSMUSG00000092344 ENSMUST00000172726 0.447±0.00 N/A N/A 1.093±0.00 0.921±0.16 0.872±0.00 0.737±0.00 0.554±0.26 0.786±0.29 0.906±0.34 0.363±0.08 1.208±0.63 0.463±0.22 0.341±0.00
ENSMUSG00000092510 ENSMUST00000172802 0.339±0.09 0.618±0.18 0.265±0.02 0.670±0.00 0.648±0.21 0.443±0.21 N/A 0.347±0.17 0.163±0.08 1.086±0.01 N/A 0.722±0.28 N/A 0.193±0.04

Loading