C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sine oculis-binding protein homolog (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040275 Sobp-001 ENSMUSG00000038248 10090 - 10:43002500-43174530 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040275
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040275 0.561±0.32 1.732±0.23 0.564±0.41 10.017±4.40 0.462±0.14 0.952±0.30 0.995±0.80 0.116±0.04 0.017±0.01 0.401±0.13 7.021±1.82 2.955±0.75 0.178±0.15 0.828±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KA CIL_0007KA_0003 UCNEbase 10:42339928-43024116

Gene Ontology

GO IDEvidence TypeGO Description
GO:0007605 IMP sensory perception of sound
GO:0007626 IMP locomotory behavior
GO:0032184 ISS SUMO polymer binding
GO:0042472 IMP inner ear morphogenesis
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317357 SOBP-001 protein_coding Homo_sapiens 0 5602
ENST00000477448 SOBP-002 retained_intron Homo_sapiens 0 1181
ENST00000494935 SOBP-003 processed_transcript Homo_sapiens 0 592
ENST00000618129 SOBP-201 protein_coding Homo_sapiens 0 632

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