C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: candidate tumor suppressor in ovarian cancer 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038268 Ovca2 10090 - 11:75175942-75178835 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000071562 Ovca2-001 75175942-75178835 protein_coding
  ENSMUST00000123489 Ovca2-002 75177801-75178787 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071562ENSMUST00000123489
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071562 8.511±2.42 6.031±1.72 7.512±1.47 6.593±1.41 5.451±1.64 2.900±0.36 7.162±0.52 4.803±1.17 6.550±0.50 0.952±0.62 7.603±2.68 4.151±2.47 2.579±1.24
ENSMUST00000123489 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.976±0.00 N/A 9.244±3.54 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007RP CIL_0007RP_0002 VISTA 11:74746156-75348336
CIL_00093G CIL_00093G_0002 VISTA 11:74749027-75350435
CIL_0007KQ CIL_0007KQ_0002 UCNEbase 11:75016990-75215448

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0032526 IEA response to retinoic acid

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076077 ovca2 ovarian tumor suppressor candidate 2 protein_coding Danio_rerio
ENSG00000262664 OVCA2 ovarian tumor suppressor candidate 2 protein_coding Homo_sapiens

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