C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatogenesis associated, serine-rich 2-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000170139 Spats2l-012 ENSMUSG00000038305 10090 + 1:57774735-57946965 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonHeartMuscleOvaryTestisENSMUST00000170139
Transcript ID Adipose Bladder Brain Colon Heart Muscle Ovary Testis
ENSMUST00000170139 2.613±0.00 3.039±0.52 6.529±1.97 0.970±0.11 0.610±0.05 0.192±0.08 2.344±0.00 0.184±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002B1 CIL_0002B1_0002 CGP 1:57406328-57948394
CIL_0002B2 CIL_0002B2_0002 CGP 1:57774162-58018956

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000358677 SPATS2L-001 protein_coding Homo_sapiens 0 2532
ENST00000360760 SPATS2L-008 protein_coding Homo_sapiens 0 1633
ENST00000366118 SPATS2L-026 protein_coding Homo_sapiens 0 272
ENST00000409140 SPATS2L-005 protein_coding Homo_sapiens 0 2532
ENST00000409151 SPATS2L-010 protein_coding Homo_sapiens 0 2159
ENST00000409385 SPATS2L-003 protein_coding Homo_sapiens 0 2409
ENST00000409397 SPATS2L-023 protein_coding Homo_sapiens 0 604
ENST00000409718 SPATS2L-002 protein_coding Homo_sapiens 0 2532
ENST00000409755 SPATS2L-201 protein_coding Homo_sapiens 0 2518
ENST00000409988 SPATS2L-004 protein_coding Homo_sapiens 0 2590
ENST00000421573 SPATS2L-019 protein_coding Homo_sapiens 0 568
ENST00000423749 SPATS2L-016 protein_coding Homo_sapiens 0 521
ENST00000438761 SPATS2L-021 protein_coding Homo_sapiens 0 481
ENST00000439084 SPATS2L-011 protein_coding Homo_sapiens 0 409
ENST00000439395 SPATS2L-012 protein_coding Homo_sapiens 0 532
ENST00000449647 SPATS2L-022 protein_coding Homo_sapiens 0 542
ENST00000451764 SPATS2L-014 protein_coding Homo_sapiens 0 2115
ENST00000453663 SPATS2L-020 protein_coding Homo_sapiens 0 544
ENST00000457757 SPATS2L-015 protein_coding Homo_sapiens 0 693
ENST00000460095 SPATS2L-025 processed_transcript Homo_sapiens 0 289
ENST00000462190 SPATS2L-024 retained_intron Homo_sapiens 0 569
ENST00000468832 SPATS2L-027 processed_transcript Homo_sapiens 0 473
ENST00000619961 SPATS2L-202 protein_coding Homo_sapiens 0 2532

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