C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ADP-ribosylation factor-like 5C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038352 Arl5c 10090 - 11:97989578-97996181 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042971 Arl5c-001 97989578-97996181 protein_coding
  ENSMUST00000107563 Arl5c-002 97993836-97995929 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042971ENSMUST00000107563
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042971 0.928±0.29 0.530±0.27 1.018±0.25 0.221±0.17 4.196±1.61 0.581±0.29 0.635±0.33 0.655±0.52 1.047±0.93 1.687±0.29 0.223±0.22 1.268±0.54 0.241±0.03 0.154±0.09
ENSMUST00000107563 N/A 0.421±0.15 N/A 0.277±0.00 N/A 0.417±0.22 0.481±0.24 0.367±0.00 0.843±0.73 N/A 0.301±0.23 1.346±0.86 2.292±3.06 0.140±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SN CIL_0008SN_0002 VISTA 11:97857859-98458466
CIL_0006QJ CIL_0006QJ_0002 CGP 11:97923238-97996181
CIL_0000TK CIL_0000TK_0003 CGP 11:97989578-98023034

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0007264 IEA small GTPase mediated signal transduction
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035719 arl5c ADP-ribosylation factor-like 5C protein_coding Danio_rerio
ENSG00000141748 ARL5C ADP-ribosylation factor-like 5C protein_coding Homo_sapiens

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