C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000TK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000035719-ENSDARG00000002167 CGP 7955 3:15754357-15847664
GeneTranscriptPositionBiotype
ENSDARG00000035719 (arl5c)
ADP-ribosylation factor-like 5C 		ENSDART00000016616 (arl5c-001) 15754357-15762038 protein_coding
ENSDART00000136560 (arl5c-002) 15754746-15761681 retained_intron
ENSDARG00000085639 (5S_rRNA)
5S ribosomal RNA 		ENSDART00000121039 (5S_rRNA.1285-201) 15820591-15820709 rRNA
CIL_0000TK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141748-ENSG00000067191 CGP 9606 17:39156894-39197703
GeneTranscriptPositionBiotype
ENSG00000067191 (CACNB1)
calcium channel, voltage-dependent, beta 1 subunit 		ENST00000344140 (CACNB1-002) 39177136-39197703 protein_coding
ENST00000394303 (CACNB1-001) 39173456-39197703 protein_coding
ENST00000394310 (CACNB1-004) 39177136-39197702 protein_coding
ENST00000492737 (CACNB1-003) 39186542-39193824 processed_transcript
ENST00000536613 (CACNB1-012) 39186423-39193493 retained_intron
ENST00000539338 (CACNB1-005) 39173801-39193883 retained_intron
ENST00000577582 (CACNB1-011) 39184325-39187439 processed_transcript
ENST00000577926 (CACNB1-008) 39192024-39195269 processed_transcript
ENST00000582414 (CACNB1-010) 39191615-39193493 retained_intron
ENST00000582544 (CACNB1-013) 39177417-39178270 retained_intron
ENST00000582877 (CACNB1-009) 39186542-39195071 processed_transcript
ENST00000622445 (CACNB1-201) 39173456-39197703 protein_coding
ENSG00000141748 (ARL5C)
ADP-ribosylation factor-like 5C 		ENST00000269586 (ARL5C-001) 39156894-39165760 protein_coding
ENST00000578912 (ARL5C-005) 39160198-39162734 nonsense_mediated_decay
ENST00000581255 (ARL5C-004) 39164975-39166161 retained_intron
ENST00000581554 (ARL5C-003) 39165073-39167484 retained_intron
ENST00000583123 (ARL5C-002) 39164079-39167065 processed_transcript
ENSG00000280177 (RP5-906A24.1)
 ENST00000623613 (RP5-906A24.1-001) 39165073-39167849 TEC
CIL_0000TK_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038352-ENSMUSG00000020882 CGP 10090 11:97989578-98023034
GeneTranscriptPositionBiotype
ENSMUSG00000020882 (Cacnb1)
calcium channel, voltage-dependent, beta 1 subunit 		ENSMUST00000017552 (Cacnb1-001) 98001508-98022634 protein_coding
ENSMUST00000092736 (Cacnb1-002) 98004925-98022634 protein_coding
ENSMUST00000103144 (Cacnb1-201) 98002901-98022627 protein_coding
ENSMUST00000107561 (Cacnb1-003) 98004747-98018372 protein_coding
ENSMUST00000107562 (Cacnb1-004) 98004925-98022634 protein_coding
ENSMUST00000124170 (Cacnb1-005) 98009660-98012551 processed_transcript
ENSMUST00000135462 (Cacnb1-006) 98009625-98023034 processed_transcript
ENSMUSG00000038352 (Arl5c)
ADP-ribosylation factor-like 5C 		ENSMUST00000042971 (Arl5c-001) 97989578-97996181 protein_coding
ENSMUST00000107563 (Arl5c-002) 97993836-97995929 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000TK_0001ENSDARG00000035719ENSDART00000016616ENSDART00000136560ENSDARG00000085639ENSDART00000121039CIL_0000TK_0002ENSG00000067191ENST00000344140ENST00000394303ENST00000394310ENST00000492737ENST00000536613ENST00000539338ENST00000577582ENST00000577926ENST00000582414ENST00000582544ENST00000582877ENST00000622445ENSG00000141748ENST00000269586ENST00000578912ENST00000581255ENST00000581554ENST00000583123ENSG00000280177ENST00000623613CIL_0000TK_0003ENSMUSG00000020882ENSMUST00000017552ENSMUST00000092736ENSMUST00000103144ENSMUST00000107561ENSMUST00000107562ENSMUST00000124170ENSMUST00000135462ENSMUSG00000038352ENSMUST00000042971ENSMUST00000107563
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000TK_0001ENSDARG00000035719ENSDART00000016616ENSDARG00000085639ENSDART00000121039CIL_0000TK_0002ENSG00000067191ENST00000344140ENST00000394303ENST00000394310ENST00000492737ENST00000536613ENST00000539338ENST00000582544ENST00000582877ENST00000622445ENSG00000141748ENST00000269586ENST00000578912ENST00000581255ENST00000583123ENSG00000280177ENST00000623613CIL_0000TK_0003ENSMUSG00000020882ENSMUST00000017552ENSMUST00000103144ENSMUST00000107561ENSMUST00000107562ENSMUSG00000038352ENSMUST00000042971ENSMUST00000107563
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000035719 ENSDART00000016616 N/A N/A N/A 7.735±4.25 N/A N/A 12.114±7.45 10.409±10.28 9.896±0.00 N/A 5.823±0.00 N/A N/A N/A
ENSDART00000136560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000085639 ENSDART00000121039 N/A N/A N/A N/A N/A N/A 1.810±0.00 N/A 0.922±0.00 N/A 3.567±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000067191 ENST00000344140 N/A N/A N/A N/A 3.326±2.27 N/A 1.356±0.00 N/A N/A N/A 87.768±77.12 N/A N/A 2.329±0.00
ENST00000394303 N/A N/A N/A 12.979±6.53 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000394310 N/A N/A N/A 4.282±0.00 N/A 0.094±0.00 0.059±0.00 N/A 0.628±0.59 0.524±0.37 N/A 0.901±0.47 0.260±0.00 N/A
ENST00000492737 N/A N/A N/A N/A N/A N/A N/A 0.945±0.00 N/A N/A N/A N/A N/A N/A
ENST00000536613 N/A N/A N/A N/A N/A N/A N/A 0.762±0.00 N/A N/A N/A N/A N/A N/A
ENST00000539338 N/A N/A N/A N/A 0.082±0.00 N/A N/A N/A N/A 0.164±0.03 N/A N/A N/A 0.446±0.00
ENST00000577582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582414 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582544 N/A N/A N/A N/A N/A N/A 1.214±0.00 1.598±0.00 N/A 2.710±0.00 N/A N/A N/A N/A
ENST00000582877 N/A N/A 1.005±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622445 0.985±0.00 1.240±0.00 0.090±0.00 N/A N/A 2.309±0.00 0.210±0.10 0.484±0.00 0.033±0.00 0.724±0.52 N/A 1.566±0.35 0.612±0.00 1.860±0.13
ENSG00000141748 ENST00000269586 0.166±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.082±0.00 0.098±0.00 N/A
ENST00000578912 0.082±0.00 0.260±0.00 N/A N/A 0.292±0.00 0.323±0.00 0.033±0.00 0.228±0.00 N/A N/A N/A N/A 0.136±0.00 0.105±0.00
ENST00000581255 N/A N/A N/A 0.471±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583123 N/A 0.464±0.00 N/A N/A 0.366±0.00 0.096±0.00 0.187±0.00 0.242±0.00 0.030±0.00 N/A 0.059±0.00 N/A N/A 0.061±0.00
ENSG00000280177 ENST00000623613 0.037±0.00 0.044±0.00 N/A 0.132±0.12 0.050±0.00 0.056±0.01 0.031±0.00 N/A 0.020±0.00 N/A N/A 0.036±0.04 0.085±0.01 0.026±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020882 ENSMUST00000017552 N/A 3.483±0.96 N/A 24.910±1.84 4.842±1.51 5.888±0.29 N/A N/A N/A 4.928±0.68 16.783±0.00 7.443±0.51 N/A 19.367±1.65
ENSMUST00000092736 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000103144 N/A N/A N/A 13.788±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.641±0.00
ENSMUST00000107561 N/A N/A N/A N/A 14.942±0.75 N/A N/A N/A N/A N/A 47.355±10.15 N/A N/A N/A
ENSMUST00000107562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.926±0.85
ENSMUST00000124170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038352 ENSMUST00000042971 0.928±0.29 0.530±0.27 1.018±0.25 0.221±0.17 4.196±1.61 0.581±0.29 0.635±0.33 0.655±0.52 1.047±0.93 1.687±0.29 0.223±0.22 1.268±0.54 0.241±0.03 0.154±0.09
ENSMUST00000107563 N/A 0.421±0.15 N/A 0.277±0.00 N/A 0.417±0.22 0.481±0.24 0.367±0.00 0.843±0.73 N/A 0.301±0.23 1.346±0.86 2.292±3.06 0.140±0.06

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