C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006QJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000161381-ENSG00000141748 CGP 9606 17:39063303-39167484
GeneTranscriptPositionBiotype
ENSG00000141748 (ARL5C)
ADP-ribosylation factor-like 5C 		ENST00000269586 (ARL5C-001) 39156894-39165760 protein_coding
ENST00000578912 (ARL5C-005) 39160198-39162734 nonsense_mediated_decay
ENST00000581255 (ARL5C-004) 39164975-39166161 retained_intron
ENST00000581554 (ARL5C-003) 39165073-39167484 retained_intron
ENST00000583123 (ARL5C-002) 39164079-39167065 processed_transcript
ENSG00000161381 (PLXDC1)
plexin domain containing 1 		ENST00000315392 (PLXDC1-001) 39063303-39151649 protein_coding
ENST00000394318 (PLXDC1-009) 39067130-39151519 retained_intron
ENST00000415163 (PLXDC1-004) 39108123-39152571 protein_coding
ENST00000441877 (PLXDC1-003) 39087629-39152612 protein_coding
ENST00000444435 (PLXDC1-006) 39096868-39107468 processed_transcript
ENST00000444911 (PLXDC1-008) 39067160-39152699 protein_coding
ENST00000461225 (PLXDC1-002) 39067132-39153232 retained_intron
ENST00000493200 (PLXDC1-005) 39067132-39132037 processed_transcript
ENST00000577838 (PLXDC1-015) 39107407-39112177 processed_transcript
ENST00000577941 (PLXDC1-014) 39109248-39153033 processed_transcript
ENST00000578277 (PLXDC1-018) 39067922-39070471 retained_intron
ENST00000578390 (PLXDC1-010) 39067130-39151519 nonsense_mediated_decay
ENST00000578517 (PLXDC1-007) 39067130-39153027 retained_intron
ENST00000578808 (PLXDC1-013) 39087608-39153032 nonsense_mediated_decay
ENST00000579190 (PLXDC1-011) 39108202-39154394 protein_coding
ENST00000579279 (PLXDC1-020) 39077949-39107487 protein_coding
ENST00000579417 (PLXDC1-017) 39072014-39078008 retained_intron
ENST00000580667 (PLXDC1-019) 39108715-39153050 processed_transcript
ENST00000582025 (PLXDC1-016) 39069981-39079270 retained_intron
ENST00000583285 (PLXDC1-012) 39126939-39153050 processed_transcript
ENSG00000280177 (RP5-906A24.1)
 ENST00000623613 (RP5-906A24.1-001) 39165073-39167849 TEC
CIL_0006QJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017417-ENSMUSG00000038352 CGP 10090 11:97923238-97996181
GeneTranscriptPositionBiotype
ENSMUSG00000017417 (Plxdc1)
plexin domain containing 1 		ENSMUST00000017561 (Plxdc1-001) 97923238-97986444 protein_coding
ENSMUST00000107564 (Plxdc1-004) 97978256-97986430 protein_coding
ENSMUST00000107565 (Plxdc1-003) 97923656-97986399 protein_coding
ENSMUST00000141708 (Plxdc1-002) 97936843-97986433 processed_transcript
ENSMUSG00000038352 (Arl5c)
ADP-ribosylation factor-like 5C 		ENSMUST00000042971 (Arl5c-001) 97989578-97996181 protein_coding
ENSMUST00000107563 (Arl5c-002) 97993836-97995929 protein_coding
ENSMUSG00000082715 (Gm11633)
predicted gene 11633 		ENSMUST00000118176 (Gm11633-001) 97968792-97969235 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QJ_0001ENSG00000141748ENST00000269586ENST00000578912ENST00000581255ENST00000581554ENST00000583123ENSG00000161381ENST00000315392ENST00000394318ENST00000415163ENST00000441877ENST00000444435ENST00000444911ENST00000461225ENST00000493200ENST00000577838ENST00000577941ENST00000578277ENST00000578390ENST00000578517ENST00000578808ENST00000579190ENST00000579279ENST00000579417ENST00000580667ENST00000582025ENST00000583285ENSG00000280177ENST00000623613CIL_0006QJ_0002ENSMUSG00000017417ENSMUST00000017561ENSMUST00000107564ENSMUST00000107565ENSMUST00000141708ENSMUSG00000038352ENSMUST00000042971ENSMUST00000107563ENSMUSG00000082715ENSMUST00000118176
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QJ_0001ENSG00000141748ENST00000269586ENST00000578912ENST00000581255ENST00000583123ENSG00000161381ENST00000315392ENST00000394318ENST00000441877ENST00000444435ENST00000444911ENST00000577838ENST00000578517ENST00000579279ENST00000582025ENSG00000280177ENST00000623613CIL_0006QJ_0002ENSMUSG00000017417ENSMUST00000017561ENSMUST00000107564ENSMUST00000107565ENSMUSG00000038352ENSMUST00000042971ENSMUST00000107563ENSMUSG00000082715ENSMUST00000118176
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000141748 ENST00000269586 0.166±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.082±0.00 0.098±0.00 N/A
ENST00000578912 0.082±0.00 0.260±0.00 N/A N/A 0.292±0.00 0.323±0.00 0.033±0.00 0.228±0.00 N/A N/A N/A N/A 0.136±0.00 0.105±0.00
ENST00000581255 N/A N/A N/A 0.471±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581554 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583123 N/A 0.464±0.00 N/A N/A 0.366±0.00 0.096±0.00 0.187±0.00 0.242±0.00 0.030±0.00 N/A 0.059±0.00 N/A N/A 0.061±0.00
ENSG00000161381 ENST00000315392 0.170±0.00 0.354±0.00 N/A 1.593±0.00 0.466±0.00 1.045±0.00 1.469±0.00 0.116±0.00 N/A N/A 0.136±0.00 0.170±0.00 0.309±0.11 N/A
ENST00000394318 0.238±0.00 1.915±0.00 0.451±0.00 N/A 1.402±0.00 1.295±0.00 1.655±0.00 0.782±0.00 N/A N/A N/A 4.527±1.89 1.923±1.28 0.644±0.00
ENST00000415163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.369±0.00 N/A N/A
ENST00000444435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.037±0.00 N/A N/A N/A
ENST00000444911 0.435±0.00 1.810±0.00 N/A 3.051±1.10 1.755±0.17 2.262±1.48 2.078±1.22 0.687±0.00 0.452±0.00 3.348±0.00 0.495±0.10 5.136±2.04 2.493±0.12 7.343±6.38
ENST00000461225 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493200 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.373±0.00 N/A N/A N/A
ENST00000577941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000578517 N/A N/A N/A 0.487±0.00 N/A N/A N/A N/A N/A 0.497±0.00 N/A N/A N/A N/A
ENST00000578808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579279 N/A N/A N/A N/A 5.637±0.00 N/A N/A N/A N/A N/A 2.401±0.00 N/A N/A N/A
ENST00000579417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582025 1.313±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000280177 ENST00000623613 0.037±0.00 0.044±0.00 N/A 0.132±0.12 0.050±0.00 0.056±0.01 0.031±0.00 N/A 0.020±0.00 N/A N/A 0.036±0.04 0.085±0.01 0.026±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017417 ENSMUST00000017561 1.928±0.76 3.585±1.00 2.055±0.26 0.623±0.61 1.775±0.58 0.902±0.22 2.014±0.51 0.331±0.09 0.294±0.16 8.113±1.52 1.453±0.45 3.227±1.47 0.238±0.26 8.411±6.76
ENSMUST00000107564 N/A 5.727±2.23 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.464±1.02 N/A N/A
ENSMUST00000107565 0.593±0.32 1.946±0.48 N/A 1.495±0.00 0.829±0.37 0.475±0.05 0.896±0.12 0.100±0.05 0.125±0.04 2.257±0.09 0.307±0.00 1.202±0.48 0.062±0.04 7.601±5.96
ENSMUST00000141708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038352 ENSMUST00000042971 0.928±0.29 0.530±0.27 1.018±0.25 0.221±0.17 4.196±1.61 0.581±0.29 0.635±0.33 0.655±0.52 1.047±0.93 1.687±0.29 0.223±0.22 1.268±0.54 0.241±0.03 0.154±0.09
ENSMUST00000107563 N/A 0.421±0.15 N/A 0.277±0.00 N/A 0.417±0.22 0.481±0.24 0.367±0.00 0.843±0.73 N/A 0.301±0.23 1.346±0.86 2.292±3.06 0.140±0.06
ENSMUSG00000082715 ENSMUST00000118176 0.249±0.10 N/A 0.029±0.00 N/A 0.370±0.26 N/A N/A N/A N/A 0.491±0.12 N/A 0.159±0.01 N/A 0.426±0.08

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