C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane channel-like gene family 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038540 Tmc3 10090 + 7:83584927-83625614 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000039317 Tmc3-001 83584931-83625614 protein_coding
  ENSMUST00000163297 Tmc3-004 83584927-83618107 retained_intron
  ENSMUST00000164944 Tmc3-003 83585092-83622947 protein_coding
  ENSMUST00000165388 Tmc3-002 83584931-83591863 retained_intron
  ENSMUST00000171397 Tmc3-005 83597527-83598900 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039317ENSMUST00000164944
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039317 0.115±0.05 0.073±0.00 0.249±0.01 0.126±0.06 0.123±0.00 0.034±0.01 0.240±0.11 0.187±0.11 0.088±0.00 0.035±0.00 0.241±0.13 0.317±0.03 0.112±0.02
ENSMUST00000164944 N/A N/A N/A N/A 0.275±0.00 N/A N/A N/A N/A N/A 0.378±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CN CIL_0009CN_0002 VISTA 7:83511918-84115428

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052723 TMC3 transmembrane channel-like 3 protein_coding Danio_rerio
ENSG00000188869 TMC3 transmembrane channel-like 3 protein_coding Homo_sapiens

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