C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane channel-like gene family 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039317 Tmc3-001 ENSMUSG00000038540 10090 + 7:83584931-83625614 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039317
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039317 0.115±0.05 0.073±0.00 0.249±0.01 0.126±0.06 0.123±0.00 0.034±0.01 0.240±0.11 0.187±0.11 0.088±0.00 0.035±0.00 0.241±0.13 0.317±0.03 0.112±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CN CIL_0009CN_0002 VISTA 7:83511918-84115428

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000359440 TMC3-001 protein_coding Homo_sapiens 0 2416
ENST00000558726 TMC3-004 protein_coding Homo_sapiens 0 2403
ENST00000559982 TMC3-002 retained_intron Homo_sapiens 0 2350

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