C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: degenerative spermatocyte homolog 1 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038633 Degs1 10090 - 1:182275772-182282804 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035295 Degs1-001 182275772-182282804 protein_coding
  ENSMUST00000132551 Degs1-002 182278497-182282804 retained_intron
  ENSMUST00000133052 Degs1-003 182279004-182282224 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035295ENSMUST00000132551ENSMUST00000133052
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035295 65.774±16.22 60.809±4.09 26.950±4.37 6.453±2.16 40.860±5.36 19.379±1.04 25.198±1.51 84.022±2.35 28.903±10.23 70.558±4.55 4.555±0.85 34.431±16.57 36.871±27.05 4.420±1.70
ENSMUST00000132551 N/A N/A N/A N/A N/A N/A N/A N/A 4.549±0.00 N/A N/A N/A N/A 1.876±1.17
ENSMUST00000133052 N/A N/A N/A N/A 37.082±0.00 N/A N/A N/A N/A N/A N/A 15.058±1.48 40.647±3.11 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R5 CIL_0007R5_0002 VISTA 1:181809962-182412053

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0005783 IEA endoplasmic reticulum
GO:0006633 IEA fatty acid biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0030148 IEA sphingolipid biosynthetic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007347 degs1 degenerative spermatocyte homolog 1, lipid desaturase (Drosophila) protein_coding Danio_rerio
ENSG00000143753 DEGS1 delta(4)-desaturase, sphingolipid 1 protein_coding Homo_sapiens

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