C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: delta(4)-desaturase, sphingolipid 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000143753 DEGS1 9606 + 1:224175756-224193441 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000323699 DEGS1-001 224183171-224193441 protein_coding
  ENST00000391877 DEGS1-201 224183266-224193157 protein_coding
  ENST00000415210 DEGS1-004 224175756-224192353 protein_coding
  ENST00000465848 DEGS1-003 224183675-224190052 processed_transcript
  ENST00000498813 DEGS1-002 224190136-224192440 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000323699ENST00000391877ENST00000415210
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000323699 15.696±0.00 19.286±0.00 1.607±0.00 11.199±6.66 10.769±7.84 6.911±6.19 6.109±4.64 16.793±0.00 4.770±1.40 9.408±6.58 2.969±0.00 8.461±5.48 49.653±32.71 11.798±0.00
ENST00000391877 8.258±0.00 5.997±0.00 N/A 5.689±3.34 8.300±3.55 4.936±1.63 5.853±0.00 2.425±1.04 3.669±1.62 8.694±5.10 2.345±0.14 4.683±0.62 28.360±7.00 6.704±0.25
ENST00000415210 N/A N/A 6.724±0.00 6.824±0.00 N/A 2.464±0.00 2.827±0.00 2.953±0.00 4.586±0.00 7.170±0.00 1.344±0.00 4.915±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000BY CIL_0000BY_0002 CGP 1:224114087-224193441
CIL_0000BX CIL_0000BX_0002 CGP 1:224175756-224330387

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0005783 TAS endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006629 IEA lipid metabolic process
GO:0006636 TAS unsaturated fatty acid biosynthetic process
GO:0006665 TAS sphingolipid metabolic process
GO:0009055 TAS electron carrier activity
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0030148 TAS:IEA sphingolipid biosynthetic process
GO:0044281 TAS small molecule metabolic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007347 degs1 degenerative spermatocyte homolog 1, lipid desaturase (Drosophila) protein_coding Danio_rerio
ENSMUSG00000038633 Degs1 degenerative spermatocyte homolog 1 (Drosophila) protein_coding Mus_musculus
ENSMUSG00000038768 9130409I23Rik RIKEN cDNA 9130409I23 gene protein_coding Mus_musculus

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