C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: degenerative spermatocyte homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000035295 Degs1-001 ENSMUSG00000038633 10090 - 1:182275772-182282804 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035295
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035295 65.774±16.22 60.809±4.09 26.950±4.37 6.453±2.16 40.860±5.36 19.379±1.04 25.198±1.51 84.022±2.35 28.903±10.23 70.558±4.55 4.555±0.85 34.431±16.57 36.871±27.05 4.420±1.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R5 CIL_0007R5_0002 VISTA 1:181809962-182412053

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IEA mitochondrion
GO:0005783 IEA endoplasmic reticulum
GO:0006633 IEA fatty acid biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0030148 IEA sphingolipid biosynthetic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000323699 DEGS1-001 protein_coding Homo_sapiens 0 924
ENST00000391877 DEGS1-201 protein_coding Homo_sapiens 0 924
ENST00000415210 DEGS1-004 protein_coding Homo_sapiens 0 741
ENST00000498813 DEGS1-002 processed_transcript Homo_sapiens 0 202

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