C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP/GTP binding protein-like 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038836 Agbl3 10090 + 6:34780432-34859459 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000115009 Agbl3-009 34780890-34785683 protein_coding
  ENSMUST00000115012 Agbl3-008 34780875-34785719 protein_coding
  ENSMUST00000115014 Agbl3-006 34780889-34785644 protein_coding
  ENSMUST00000115016 Agbl3-001 34780432-34857932 protein_coding
  ENSMUST00000115017 Agbl3-010 34780432-34857932 protein_coding
  ENSMUST00000135304 Agbl3-002 34780442-34803789 nonsense_mediated_decay
  ENSMUST00000143474 Agbl3-003 34780452-34799042 retained_intron
  ENSMUST00000148834 Agbl3-007 34780848-34859459 nonsense_mediated_decay
  ENSMUST00000155726 Agbl3-004 34780875-34805631 retained_intron
  ENSMUST00000155890 Agbl3-005 34780876-34801610 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000115009ENSMUST00000115012ENSMUST00000115014ENSMUST00000115017ENSMUST00000135304ENSMUST00000143474ENSMUST00000148834ENSMUST00000155726ENSMUST00000155890
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000115009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.437±0.00 N/A N/A N/A
ENSMUST00000115012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.311±0.07 N/A 0.932±0.82 N/A
ENSMUST00000115014 2.919±1.70 N/A 2.871±0.85 2.958±0.61 3.366±0.00 0.699±0.00 0.763±0.29 3.951±0.00 1.567±0.45 N/A 0.663±0.18 2.555±1.69 1.181±0.87 N/A
ENSMUST00000115017 N/A N/A N/A N/A 0.348±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 5.725±1.79
ENSMUST00000135304 0.348±0.04 N/A 0.463±0.00 1.459±0.00 0.491±0.05 0.201±0.05 0.148±0.03 N/A 0.372±0.13 0.417±0.01 0.152±0.09 0.665±0.05 0.128±0.05 N/A
ENSMUST00000143474 1.738±0.18 4.560±2.16 N/A N/A 2.149±0.89 0.769±0.23 0.494±0.00 1.781±0.43 0.661±0.17 1.024±0.00 N/A 5.591±0.76 0.046±0.00 N/A
ENSMUST00000148834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.688±0.37
ENSMUST00000155726 N/A N/A N/A N/A 0.293±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155890 N/A N/A 0.472±0.00 0.179±0.00 0.327±0.00 N/A N/A 0.924±0.00 N/A N/A 0.097±0.02 0.396±0.17 0.079±0.06 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002H0 CIL_0002H0_0002 CGP 6:34598500-34859459

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0006508 IEA proteolysis
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000146856 AGBL3 ATP/GTP binding protein-like 3 protein_coding Homo_sapiens

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