C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP/GTP binding protein-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000135304 Agbl3-002 ENSMUSG00000038836 10090 + 6:34780442-34803789 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaENSMUST00000135304
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta
ENSMUST00000135304 0.348±0.04 0.463±0.00 1.459±0.00 0.491±0.05 0.201±0.05 0.148±0.03 0.372±0.13 0.417±0.01 0.152±0.09 0.665±0.05 0.128±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002H0 CIL_0002H0_0002 CGP 6:34598500-34859459

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000275763 AGBL3-001 nonsense_mediated_decay Homo_sapiens 0 1712
ENST00000435976 AGBL3-006 protein_coding Homo_sapiens 0 1712
ENST00000436302 AGBL3-007 protein_coding Homo_sapiens 0 1722
ENST00000476700 AGBL3-003 retained_intron Homo_sapiens 0 355
ENST00000494702 AGBL3-005 processed_transcript Homo_sapiens 0 361

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