C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP/GTP binding protein-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143474 Agbl3-003 ENSMUSG00000038836 10090 + 6:34780452-34799042 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000143474
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000143474 1.738±0.18 4.560±2.16 2.149±0.89 0.769±0.23 0.494±0.00 1.781±0.43 0.661±0.17 1.024±0.00 5.591±0.76 0.046±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002H0 CIL_0002H0_0002 CGP 6:34598500-34859459

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000275763 AGBL3-001 nonsense_mediated_decay Homo_sapiens 0 654
ENST00000435976 AGBL3-006 protein_coding Homo_sapiens 0 654
ENST00000436302 AGBL3-007 protein_coding Homo_sapiens 0 664
ENST00000476700 AGBL3-003 retained_intron Homo_sapiens 0 355
ENST00000494702 AGBL3-005 processed_transcript Homo_sapiens 0 361

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