C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, CCHC domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038866 Zcchc2 10090 + 1:105990406-106034074 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000118196 Zcchc2-001 105990406-106034074 protein_coding
  ENSMUST00000119166 Zcchc2-002 105990689-106034067 protein_coding
  ENSMUST00000131830 Zcchc2-003 106011744-106023258 nonsense_mediated_decay
  ENSMUST00000186983 Zcchc2-004 106004122-106032448 protein_coding
  ENSMUST00000188954 Zcchc2-005 106004137-106027501 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118196ENSMUST00000119166ENSMUST00000186983ENSMUST00000188954
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118196 2.980±0.93 2.392±0.62 N/A 3.886±0.62 4.145±1.90 2.084±0.42 0.371±0.00 2.097±0.76 2.540±0.77 1.558±0.26 0.731±0.33 3.367±1.21 3.502±2.28 11.118±4.05
ENSMUST00000119166 3.722±0.35 2.513±0.65 2.329±0.03 1.253±0.48 2.858±1.04 1.454±0.40 0.599±0.18 1.273±0.47 1.968±0.62 2.362±0.74 0.948±0.29 2.178±0.92 1.741±0.26 7.088±2.81
ENSMUST00000186983 1.620±0.00 8.196±1.87 N/A 2.264±0.00 9.595±1.20 4.970±0.90 0.736±0.14 2.781±1.43 4.494±0.87 N/A 0.636±0.10 6.992±1.64 N/A 11.368±1.60
ENSMUST00000188954 N/A N/A N/A 8.845±0.00 N/A N/A N/A N/A N/A N/A N/A 8.621±0.00 12.281±5.47 34.336±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00076G CIL_00076G_0002 CGP 1:105780718-106034074
CIL_00076H CIL_00076H_0002 CGP 1:105990406-106394250

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0035091 IEA phosphatidylinositol binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000067950 ZCCHC2 zinc finger, CCHC domain containing 2 protein_coding Danio_rerio
ENSG00000141664 ZCCHC2 zinc finger, CCHC domain containing 2 protein_coding Homo_sapiens

Loading