C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, CCHC domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000141664 ZCCHC2 9606 + 18:62523007-62587709 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000269499 ZCCHC2-005 62523007-62578583 protein_coding
  ENST00000585873 ZCCHC2-001 62523667-62586729 nonsense_mediated_decay
  ENST00000585949 ZCCHC2-007 62560353-62576729 retained_intron
  ENST00000586834 ZCCHC2-004 62539514-62578579 protein_coding
  ENST00000587612 ZCCHC2-009 62574479-62575499 processed_transcript
  ENST00000588676 ZCCHC2-006 62523619-62525495 protein_coding
  ENST00000590840 ZCCHC2-011 62581805-62586729 processed_transcript
  ENST00000591145 ZCCHC2-010 62575298-62587709 nonsense_mediated_decay
  ENST00000591435 ZCCHC2-008 62558542-62564602 retained_intron
  ENST00000591632 ZCCHC2-002 62524173-62563065 processed_transcript
  ENST00000621048 ZCCHC2-012 62526889-62560644 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000269499ENST00000585873ENST00000585949ENST00000586834ENST00000590840ENST00000591435ENST00000621048
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000269499 3.467±0.00 1.683±0.00 N/A 2.456±1.40 2.715±0.00 1.791±1.05 1.063±0.00 1.494±0.94 1.031±0.27 4.011±0.00 1.958±0.00 1.199±1.01 1.186±0.70 9.964±0.00
ENST00000585873 N/A N/A 0.227±0.00 N/A 0.858±0.00 N/A 0.356±0.00 0.855±0.00 0.441±0.00 0.550±0.00 4.940±0.00 0.839±0.00 N/A 3.582±0.00
ENST00000585949 N/A N/A 0.724±0.00 1.442±0.00 2.248±0.00 N/A N/A N/A 2.094±0.00 1.377±0.00 1.273±0.00 0.618±0.00 N/A N/A
ENST00000586834 N/A N/A 0.498±0.00 N/A 1.344±0.00 N/A 0.684±0.00 0.556±0.00 0.793±0.15 2.533±0.00 0.361±0.00 1.345±0.00 N/A 5.928±0.00
ENST00000590840 N/A N/A N/A N/A N/A 1.089±0.00 N/A 1.423±0.00 N/A N/A N/A N/A N/A N/A
ENST00000591435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.640±0.00 N/A N/A N/A
ENST00000621048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.973±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00076G CIL_00076G_0001 CGP 18:62325287-62587709
CIL_00076H CIL_00076H_0001 CGP 18:62523007-62980433

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005737 IDA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0035091 IEA phosphatidylinositol binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000067950 ZCCHC2 zinc finger, CCHC domain containing 2 protein_coding Danio_rerio
ENSMUSG00000038866 Zcchc2 zinc finger, CCHC domain containing 2 protein_coding Mus_musculus

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