C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00065S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000088571-ENSDARG00000005959 CGP 7955 16:6457885-6506141
GeneTranscriptPositionBiotype
ENSDARG00000005959 (echdc1)
enoyl Coenzyme A hydratase domain containing 1
ENSDART00000060190 (echdc1-201) 6495161-6506141 protein_coding
ENSDARG00000088571 (soga3a)
SOGA family member 3a
ENSDART00000145368 (soga3a-001) 6457885-6487240 protein_coding
ENSDARG00000097245 (soga3a)
SOGA family member 3a
ENSDART00000092402 (soga3a-201) 6443654-6455176 protein_coding
ENSDART00000130374 (soga3a-202) 6472170-6480417 protein_coding
ENSDART00000156765 (soga3a-001) 6440245-6487240 nonsense_mediated_decay
CIL_00065S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000004360-ENSMUSG00000019883 CGP 10090 10:29211643-29346661
GeneTranscriptPositionBiotype
ENSMUSG00000004360 (9330159F19Rik)
RIKEN cDNA 9330159F19 gene
ENSMUST00000092627 (9330159F19Rik-201) 29211643-29230779 protein_coding
ENSMUSG00000038876 (Rnf146)
ring finger protein 146
ENSMUST00000037548 (Rnf146-201) 29344178-29362442 protein_coding
ENSMUST00000160144 (Rnf146-001) 29346171-29362442 protein_coding
ENSMUST00000160372 (Rnf146-002) 29346176-29362040 protein_coding
ENSMUST00000161508 (Rnf146-004) 29347219-29362023 protein_coding
ENSMUST00000162335 (Rnf146-003) 29346658-29357713 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00065S_0001ENSDARG00000005959ENSDART00000060190ENSDARG00000088571ENSDART00000145368ENSDARG00000097245ENSDART00000092402ENSDART00000130374ENSDART00000156765CIL_00065S_0002ENSMUSG00000004360ENSMUST00000092627ENSMUSG00000038876ENSMUST00000037548ENSMUST00000160144ENSMUST00000160372ENSMUST00000161508ENSMUST00000162335
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00065S_0001ENSDARG00000005959ENSDART00000060190ENSDARG00000088571ENSDART00000145368ENSDARG00000097245ENSDART00000092402ENSDART00000130374ENSDART00000156765CIL_00065S_0002ENSMUSG00000004360ENSMUST00000092627ENSMUSG00000038876ENSMUST00000037548ENSMUST00000160144ENSMUST00000160372ENSMUST00000161508ENSMUST00000162335
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000005959 ENSDART00000060190 N/A N/A N/A 0.718±0.43 N/A N/A 1.782±0.76 0.293±0.00 0.047±0.00 N/A 0.071±0.00 N/A N/A N/A
ENSDARG00000088571 ENSDART00000145368 N/A N/A N/A 4.277±1.03 N/A N/A 2.287±0.00 1.017±0.30 0.053±0.00 N/A 4.290±0.00 N/A N/A N/A
ENSDARG00000097245 ENSDART00000092402 N/A N/A N/A N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A N/A N/A
ENSDART00000130374 N/A N/A N/A N/A N/A N/A 0.390±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000156765 N/A N/A N/A 5.230±1.73 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000004360 ENSMUST00000092627 0.510±0.11 0.258±0.10 1.658±0.15 12.038±7.48 0.372±0.17 0.159±0.07 0.099±0.07 0.052±0.02 0.017±0.01 0.447±0.16 2.764±1.07 0.150±0.06 0.014±0.01 0.064±0.04
ENSMUSG00000038876 ENSMUST00000037548 10.149±0.00 2.560±0.68 6.978±2.72 4.117±0.62 12.074±0.00 1.335±0.09 2.526±0.16 5.493±1.68 5.492±2.98 3.828±0.58 1.867±0.34 4.539±4.09 4.567±2.38 5.507±0.00
ENSMUST00000160144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.186±0.00
ENSMUST00000160372 N/A N/A 11.877±1.64 10.939±3.97 N/A 3.282±0.54 5.688±1.70 5.183±0.21 6.443±1.35 5.841±1.96 5.498±1.54 4.417±1.02 7.205±3.18 N/A
ENSMUST00000161508 N/A N/A N/A 31.728±0.00 N/A N/A N/A N/A N/A N/A N/A 37.069±0.00 22.860±4.99 31.044±0.00
ENSMUST00000162335 10.757±2.33 11.311±3.44 15.244±0.00 14.021±0.40 10.779±1.37 8.731±2.59 7.780±1.89 10.955±2.44 8.728±1.62 13.398±1.83 5.639±1.19 17.196±3.68 5.838±0.45 20.970±2.00

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