C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier organic anion transporter family, member 4a1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000038259 Slco4a1-001 ENSMUSG00000038963 10090 + 2:180456245-180474867 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000038259
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000038259 0.410±0.24 0.092±0.00 0.523±0.43 0.313±0.04 0.812±0.19 3.237±0.80 10.519±1.78 0.592±0.14 1.220±0.44 0.017±0.01 0.745±0.45 44.413±48.86 0.212±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001O5 CIL_0001O5_0002 CGP 2:180456245-180544980

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005886 IEA plasma membrane
GO:0006811 IEA ion transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000217159 SLCO4A1-201 protein_coding Homo_sapiens 0 1561
ENST00000370507 SLCO4A1-006 protein_coding Homo_sapiens 0 1561
ENST00000497209 SLCO4A1-005 nonsense_mediated_decay Homo_sapiens 0 1105

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