C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: stromal interaction molecule 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039156 Stim2 10090 + 5:53998417-54121057 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000071083 Stim2-004 53998565-54119592 protein_coding
  ENSMUST00000117661 Stim2-001 53998417-54121057 protein_coding
  ENSMUST00000129109 Stim2-005 54115857-54118587 retained_intron
  ENSMUST00000152812 Stim2-002 54105368-54119933 protein_coding
  ENSMUST00000155608 Stim2-003 54074737-54104489 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000071083ENSMUST00000117661ENSMUST00000129109ENSMUST00000152812
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000071083 8.309±0.11 9.685±1.75 2.206±0.30 9.850±8.84 11.606±3.06 14.942±1.77 3.217±0.22 4.840±1.45 2.457±1.06 17.274±5.02 7.997±1.36 11.120±2.43 3.084±1.97 2.378±0.19
ENSMUST00000117661 N/A N/A 0.458±0.04 1.669±1.49 N/A N/A 0.490±0.00 N/A 0.267±0.06 N/A N/A 1.873±0.00 0.284±0.14 0.283±0.00
ENSMUST00000129109 N/A 10.038±1.83 N/A N/A N/A 16.537±0.00 N/A N/A 3.200±0.40 N/A N/A N/A N/A N/A
ENSMUST00000152812 N/A 2.372±0.00 1.363±0.29 2.034±0.03 N/A 6.265±1.06 N/A 1.927±0.90 1.147±0.44 3.010±0.00 3.364±0.29 4.726±0.13 1.666±0.65 0.685±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TT CIL_0002TT_0003 CGP 5:53809627-54121057
CIL_00079S CIL_00079S_0002 CGP 5:53998417-58129351

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005246 ISS calcium channel regulator activity
GO:0005509 ISS calcium ion binding
GO:0005515 IPI protein binding
GO:0005783 ISS endoplasmic reticulum
GO:0005886 ISS plasma membrane
GO:0006874 ISS cellular calcium ion homeostasis
GO:0015279 ISS store-operated calcium channel activity
GO:0016021 ISA integral component of membrane
GO:0032237 ISS activation of store-operated calcium channel activity
GO:0051928 ISS positive regulation of calcium ion transport
GO:0070588 ISS calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000001776 stim2b stromal interaction molecule 2b protein_coding Danio_rerio
ENSDARG00000074867 STIM2 (2 of 2) stromal interaction molecule 2 protein_coding Danio_rerio
ENSG00000109689 STIM2 stromal interaction molecule 2 protein_coding Homo_sapiens

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