C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stromal interaction molecule 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117661 Stim2-001 ENSMUSG00000039156 10090 + 5:53998417-54121057 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartLiverOvaryPlacentaTestisENSMUST00000117661
Transcript ID Bladder Brain Heart Liver Ovary Placenta Testis
ENSMUST00000117661 0.458±0.04 1.669±1.49 0.490±0.00 0.267±0.06 1.873±0.00 0.284±0.14 0.283±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TT CIL_0002TT_0003 CGP 5:53809627-54121057
CIL_00079S CIL_00079S_0002 CGP 5:53998417-58129351

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005246 ISS calcium channel regulator activity
GO:0005509 ISS calcium ion binding
GO:0005515 IPI protein binding
GO:0005783 ISS endoplasmic reticulum
GO:0005886 ISS plasma membrane
GO:0006874 ISS cellular calcium ion homeostasis
GO:0015279 ISS store-operated calcium channel activity
GO:0016021 ISA integral component of membrane
GO:0032237 ISS activation of store-operated calcium channel activity
GO:0051928 ISS positive regulation of calcium ion transport
GO:0070588 ISS calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000463501 STIM2-007 protein_coding Homo_sapiens 0 736
ENST00000465503 STIM2-002 protein_coding Homo_sapiens 0 3352
ENST00000467011 STIM2-003 protein_coding Homo_sapiens 0 1910
ENST00000467087 STIM2-001 protein_coding Homo_sapiens 0 3716
ENST00000473519 STIM2-004 protein_coding Homo_sapiens 0 959
ENST00000477474 STIM2-005 protein_coding Homo_sapiens 0 592
ENST00000478049 STIM2-006 protein_coding Homo_sapiens 0 285
ENST00000494628 STIM2-008 protein_coding Homo_sapiens 0 529
ENST00000504511 STIM2-010 retained_intron Homo_sapiens 2e-36 156

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