C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: proline-rich coiled-coil 2B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000036691 Prrc2b-001 ENSMUSG00000039262 10090 + 2:32151082-32234537 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036691
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036691 12.726±3.63 13.904±4.03 6.059±2.80 26.917±6.91 13.054±1.29 9.436±1.20 8.922±0.74 13.087±0.50 3.997±1.93 20.837±1.58 5.127±0.08 21.180±7.35 9.208±1.98 0.708±0.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088E CIL_00088E_0002 VISTA 2:31827730-32428586
CIL_0002ED CIL_0002ED_0003 CGP 2:32095528-32234537
CIL_0006ID CIL_0006ID_0002 CGP 2:32151082-32255005

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320547 PRRC2B-005 protein_coding Homo_sapiens 0 752
ENST00000357304 PRRC2B-201 protein_coding Homo_sapiens 0 2614
ENST00000405995 PRRC2B-001 protein_coding Homo_sapiens 0 5011
ENST00000417340 RP4-682E18.1-001 processed_pseudogene Homo_sapiens 1e-16 92
ENST00000451855 PRRC2B-004 protein_coding Homo_sapiens 0 1118
ENST00000456307 PRRC2B-002 protein_coding Homo_sapiens 5e-28 128
ENST00000458550 PRRC2B-202 protein_coding Homo_sapiens 0 1098
ENST00000465931 PRRC2B-006 processed_transcript Homo_sapiens 0 436
ENST00000489593 PRRC2B-007 processed_transcript Homo_sapiens 0 394

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