C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cadherin 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039385 Cdh6 10090 - 15:13034200-13173639 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000036439 Cdh6-201 13034200-13173639 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000036439
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000036439 0.302±0.25 2.292±1.14 1.111±0.00 0.062±0.03 0.424±0.10 0.117±0.04 1.327±0.77 0.036±0.02 0.353±0.06 0.027±0.01 0.511±0.13 0.144±0.08 0.054±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MJ CIL_0006MJ_0005 CGP 15:13034200-16857094

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IDA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016021 IEA integral component of membrane
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014522 cdh6 cadherin 6 protein_coding Danio_rerio
ENSDARG00000055843 cdh10 cadherin 10, type 2 (T2-cadherin) protein_coding Danio_rerio
ENSDARG00000091395 CABZ01067945.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000113361 CDH6 cadherin 6, type 2, K-cadherin (fetal kidney) protein_coding Homo_sapiens

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