C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DNA segment, Chr 2, Wayne State University 81, expressed
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039660 D2Wsu81e 10090 - 2:30173453-30178459 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000100220 D2Wsu81e-001 30173471-30178450 protein_coding
  ENSMUST00000125141 D2Wsu81e-007 30176363-30178455 retained_intron
  ENSMUST00000127309 D2Wsu81e-003 30173453-30178442 retained_intron
  ENSMUST00000136630 D2Wsu81e-006 30173468-30177505 retained_intron
  ENSMUST00000137656 D2Wsu81e-008 30174931-30177965 processed_transcript
  ENSMUST00000142669 D2Wsu81e-004 30173453-30178429 retained_intron
  ENSMUST00000144093 D2Wsu81e-002 30173473-30178459 retained_intron
  ENSMUST00000146466 D2Wsu81e-005 30173471-30177984 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100220ENSMUST00000127309ENSMUST00000136630ENSMUST00000142669ENSMUST00000144093ENSMUST00000146466
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100220 8.555±1.45 N/A 11.728±0.98 14.481±3.99 6.957±3.66 8.561±1.90 3.926±0.64 9.312±1.63 13.456±5.65 7.397±0.96 4.717±1.06 15.677±8.83 18.536±9.61 69.187±27.68
ENSMUST00000127309 2.463±0.00 N/A N/A 3.014±0.31 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136630 5.885±0.00 13.993±0.76 N/A 13.781±0.00 9.418±3.25 7.910±2.31 4.486±0.32 5.944±0.00 N/A N/A 2.659±0.69 14.602±2.06 16.626±4.96 N/A
ENSMUST00000142669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.394±0.00 N/A
ENSMUST00000144093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.508±1.64
ENSMUST00000146466 3.192±0.00 N/A N/A 2.892±0.59 1.196±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005L7 CIL_0005L7_0002 CGP 2:30133746-30174069
CIL_00017W CIL_00017W_0002 CGP 2:30171493-30178459
CIL_0005L9 CIL_0005L9_0002 CGP 2:30173453-30205847

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019707 C21H9orf114 chromosome 9 open reading frame 114 protein_coding Danio_rerio
ENSG00000198917 C9orf114 chromosome 9 open reading frame 114 protein_coding Homo_sapiens

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