C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DNA segment, Chr 2, Wayne State University 81, expressed
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100220 D2Wsu81e-001 ENSMUSG00000039660 10090 - 2:30173471-30178450 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100220
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100220 8.555±1.45 11.728±0.98 14.481±3.99 6.957±3.66 8.561±1.90 3.926±0.64 9.312±1.63 13.456±5.65 7.397±0.96 4.717±1.06 15.677±8.83 18.536±9.61 69.187±27.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005L7 CIL_0005L7_0002 CGP 2:30133746-30174069
CIL_00017W CIL_00017W_0002 CGP 2:30171493-30178459
CIL_0005L9 CIL_0005L9_0002 CGP 2:30173453-30205847

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361256 C9orf114-001 protein_coding Homo_sapiens 0 1495
ENST00000372642 ENDOG-001 protein_coding Homo_sapiens 0 339
ENST00000466556 C9orf114-002 retained_intron Homo_sapiens 0 481
ENST00000467396 C9orf114-005 retained_intron Homo_sapiens 0 492
ENST00000467582 C9orf114-003 protein_coding Homo_sapiens 0 374
ENST00000480366 C9orf114-004 retained_intron Homo_sapiens 0 647
ENST00000622809 C9orf114-201 protein_coding Homo_sapiens 0 1474

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