C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005L7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000107021-ENSG00000167136 CGP 9606 9:128787204-128822677
GeneTranscriptPositionBiotype
ENSG00000107021 (TBC1D13)
TBC1 domain family, member 13 		ENST00000223865 (TBC1D13-001) 128787349-128810424 protein_coding
ENST00000372648 (TBC1D13-002) 128787204-128810432 protein_coding
ENST00000466056 (TBC1D13-003) 128787333-128803448 processed_transcript
ENST00000475097 (TBC1D13-004) 128787270-128797130 processed_transcript
ENSG00000167136 (ENDOG)
endonuclease G 		ENST00000372642 (ENDOG-001) 128818474-128822677 protein_coding
ENSG00000198917 (C9orf114)
chromosome 9 open reading frame 114 		ENST00000361256 (C9orf114-001) 128819651-128829821 protein_coding
ENST00000466556 (C9orf114-002) 128825982-128829779 retained_intron
ENST00000467396 (C9orf114-005) 128826021-128827210 retained_intron
ENST00000467582 (C9orf114-003) 128822091-128824822 protein_coding
ENST00000480366 (C9orf114-004) 128822798-128826223 retained_intron
ENST00000622809 (C9orf114-201) 128819653-128829821 protein_coding
CIL_0005L7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039678-ENSMUSG00000015337 CGP 10090 2:30133746-30174069
GeneTranscriptPositionBiotype
ENSMUSG00000015337 (Endog)
endonuclease G 		ENSMUST00000015481 (Endog-001) 30171493-30174069 protein_coding
ENSMUSG00000039660 (D2Wsu81e)
DNA segment, Chr 2, Wayne State University 81, expressed 		ENSMUST00000100220 (D2Wsu81e-001) 30173471-30178450 protein_coding
ENSMUST00000125141 (D2Wsu81e-007) 30176363-30178455 retained_intron
ENSMUST00000127309 (D2Wsu81e-003) 30173453-30178442 retained_intron
ENSMUST00000136630 (D2Wsu81e-006) 30173468-30177505 retained_intron
ENSMUST00000137656 (D2Wsu81e-008) 30174931-30177965 processed_transcript
ENSMUST00000142669 (D2Wsu81e-004) 30173453-30178429 retained_intron
ENSMUST00000144093 (D2Wsu81e-002) 30173473-30178459 retained_intron
ENSMUST00000146466 (D2Wsu81e-005) 30173471-30177984 retained_intron
ENSMUSG00000039678 (Tbc1d13)
TBC1 domain family, member 13 		ENSMUST00000044556 (Tbc1d13-001) 30133746-30152013 protein_coding
ENSMUST00000125142 (Tbc1d13-005) 30133791-30137179 processed_transcript
ENSMUST00000129789 (Tbc1d13-007) 30137030-30142524 processed_transcript
ENSMUST00000131261 (Tbc1d13-003) 30133806-30136676 nonsense_mediated_decay
ENSMUST00000132324 (Tbc1d13-008) 30142279-30147078 retained_intron
ENSMUST00000134013 (Tbc1d13-006) 30133821-30137513 processed_transcript
ENSMUST00000136183 (Tbc1d13-002) 30133746-30137296 nonsense_mediated_decay
ENSMUST00000150879 (Tbc1d13-004) 30133772-30135152 retained_intron
ENSMUSG00000085401 (Slc39a1-ps)
solute carrier family 39 (zinc transporter), member 1, pseudogene 		ENSMUST00000120862 (Slc39a1-ps-001) 30159398-30160366 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005L7_0001ENSG00000107021ENST00000223865ENST00000372648ENST00000466056ENST00000475097ENSG00000167136ENST00000372642ENSG00000198917ENST00000361256ENST00000466556ENST00000467396ENST00000467582ENST00000480366ENST00000622809CIL_0005L7_0002ENSMUSG00000015337ENSMUST00000015481ENSMUSG00000039660ENSMUST00000100220ENSMUST00000125141ENSMUST00000127309ENSMUST00000136630ENSMUST00000137656ENSMUST00000142669ENSMUST00000144093ENSMUST00000146466ENSMUSG00000039678ENSMUST00000044556ENSMUST00000125142ENSMUST00000129789ENSMUST00000131261ENSMUST00000132324ENSMUST00000134013ENSMUST00000136183ENSMUST00000150879ENSMUSG00000085401ENSMUST00000120862
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005L7_0001ENSG00000107021ENST00000223865ENST00000372648ENST00000466056ENSG00000167136ENST00000372642ENSG00000198917ENST00000361256ENST00000466556ENST00000467396ENST00000467582ENST00000622809CIL_0005L7_0002ENSMUSG00000015337ENSMUST00000015481ENSMUSG00000039660ENSMUST00000100220ENSMUST00000127309ENSMUST00000136630ENSMUST00000142669ENSMUST00000144093ENSMUST00000146466ENSMUSG00000039678ENSMUST00000044556ENSMUSG00000085401ENSMUST00000120862
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107021 ENST00000223865 N/A N/A N/A N/A N/A 1.040±0.00 0.438±0.00 4.321±0.00 0.951±0.26 0.663±0.00 1.058±0.00 4.812±0.00 1.171±0.00 N/A
ENST00000372648 6.563±0.00 6.162±0.00 2.807±0.00 5.856±4.53 4.486±4.07 3.547±0.00 5.929±0.00 6.607±0.00 0.709±0.08 0.988±0.68 2.694±1.73 7.136±5.08 4.684±1.49 4.687±1.71
ENST00000466056 N/A N/A N/A N/A 0.918±0.00 0.573±0.00 N/A 1.535±0.00 0.692±0.00 N/A N/A 1.186±0.00 N/A N/A
ENST00000475097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000167136 ENST00000372642 N/A N/A N/A 1.678±0.00 6.009±0.00 N/A 5.602±4.77 13.242±0.00 9.614±0.00 4.406±0.00 7.996±6.17 N/A 12.990±1.26 N/A
ENSG00000198917 ENST00000361256 1.985±0.00 N/A N/A 0.250±0.00 0.325±0.00 0.375±0.00 0.118±0.00 0.366±0.00 0.370±0.00 N/A N/A 0.887±0.73 4.845±0.00 N/A
ENST00000466556 N/A N/A N/A N/A N/A N/A N/A N/A 1.094±0.00 N/A N/A N/A N/A N/A
ENST00000467396 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.465±0.00 N/A N/A
ENST00000467582 9.343±0.00 18.381±0.00 N/A 6.019±4.61 10.730±0.00 4.966±3.60 6.302±5.81 10.184±7.35 7.495±5.98 7.655±0.00 10.882±6.61 17.582±6.29 21.027±3.67 20.428±10.45
ENST00000480366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622809 1.826±0.00 6.245±0.00 N/A 1.911±1.65 1.931±1.60 1.962±1.59 0.934±0.77 2.693±2.32 1.273±0.89 1.486±0.00 1.854±0.00 6.299±3.30 6.129±2.80 4.398±0.78
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015337 ENSMUST00000015481 19.808±4.84 61.538±14.84 N/A 8.268±1.24 32.678±7.79 28.194±9.16 27.373±13.48 27.130±10.96 25.735±13.67 18.222±7.90 15.106±1.10 27.294±7.61 5.107±0.00 N/A
ENSMUSG00000039660 ENSMUST00000100220 8.555±1.45 N/A 11.728±0.98 14.481±3.99 6.957±3.66 8.561±1.90 3.926±0.64 9.312±1.63 13.456±5.65 7.397±0.96 4.717±1.06 15.677±8.83 18.536±9.61 69.187±27.68
ENSMUST00000125141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127309 2.463±0.00 N/A N/A 3.014±0.31 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136630 5.885±0.00 13.993±0.76 N/A 13.781±0.00 9.418±3.25 7.910±2.31 4.486±0.32 5.944±0.00 N/A N/A 2.659±0.69 14.602±2.06 16.626±4.96 N/A
ENSMUST00000137656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.394±0.00 N/A
ENSMUST00000144093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.508±1.64
ENSMUST00000146466 3.192±0.00 N/A N/A 2.892±0.59 1.196±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039678 ENSMUST00000044556 20.631±2.15 17.485±12.01 9.564±1.76 17.276±6.10 17.939±10.89 15.618±12.40 7.121±0.55 41.761±19.56 10.243±4.18 19.646±4.61 1.667±0.90 17.449±10.77 14.544±6.78 6.993±3.46
ENSMUST00000125142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085401 ENSMUST00000120862 0.053±0.01 0.109±0.04 N/A 0.683±0.00 0.057±0.02 0.068±0.02 0.030±0.00 0.046±0.01 0.363±0.17 0.040±0.00 N/A 0.106±0.00 0.061±0.00 0.060±0.00

Loading