C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DNA segment, Chr 2, Wayne State University 81, expressed
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136630 D2Wsu81e-006 ENSMUSG00000039660 10090 - 2:30173468-30177505 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyMuscleOvaryPlacentaENSMUST00000136630
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Muscle Ovary Placenta
ENSMUST00000136630 5.885±0.00 13.993±0.76 13.781±0.00 9.418±3.25 7.910±2.31 4.486±0.32 5.944±0.00 2.659±0.69 14.602±2.06 16.626±4.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005L7 CIL_0005L7_0002 CGP 2:30133746-30174069
CIL_00017W CIL_00017W_0002 CGP 2:30171493-30178459
CIL_0005L9 CIL_0005L9_0002 CGP 2:30173453-30205847

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361256 C9orf114-001 protein_coding Homo_sapiens 0 1253
ENST00000372642 ENDOG-001 protein_coding Homo_sapiens 0 339
ENST00000467582 C9orf114-003 protein_coding Homo_sapiens 0 374
ENST00000480366 C9orf114-004 retained_intron Homo_sapiens 0 647
ENST00000622809 C9orf114-201 protein_coding Homo_sapiens 0 1232

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