C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TBC1 domain family, member 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039678 Tbc1d13 10090 + 2:30133746-30152013 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000044556 Tbc1d13-001 30133746-30152013 protein_coding
  ENSMUST00000125142 Tbc1d13-005 30133791-30137179 processed_transcript
  ENSMUST00000129789 Tbc1d13-007 30137030-30142524 processed_transcript
  ENSMUST00000131261 Tbc1d13-003 30133806-30136676 nonsense_mediated_decay
  ENSMUST00000132324 Tbc1d13-008 30142279-30147078 retained_intron
  ENSMUST00000134013 Tbc1d13-006 30133821-30137513 processed_transcript
  ENSMUST00000136183 Tbc1d13-002 30133746-30137296 nonsense_mediated_decay
  ENSMUST00000150879 Tbc1d13-004 30133772-30135152 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044556
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044556 20.631±2.15 17.485±12.01 9.564±1.76 17.276±6.10 17.939±10.89 15.618±12.40 7.121±0.55 41.761±19.56 10.243±4.18 19.646±4.61 1.667±0.90 17.449±10.77 14.544±6.78 6.993±3.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006W4 CIL_0006W4_0002 CGP 2:30097283-30152013
CIL_0005L7 CIL_0005L7_0002 CGP 2:30133746-30174069

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078274 TBC1 domain family, member 13 protein_coding Danio_rerio
ENSG00000107021 TBC1D13 TBC1 domain family, member 13 protein_coding Homo_sapiens

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