C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006W4_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000160445-ENSG00000107021 CGP 9606 9:128729786-128810432
GeneTranscriptPositionBiotype
ENSG00000107021 (TBC1D13)
TBC1 domain family, member 13 		ENST00000223865 (TBC1D13-001) 128787349-128810424 protein_coding
ENST00000372648 (TBC1D13-002) 128787204-128810432 protein_coding
ENST00000466056 (TBC1D13-003) 128787333-128803448 processed_transcript
ENST00000475097 (TBC1D13-004) 128787270-128797130 processed_transcript
ENSG00000160445 (ZER1)
zyg-11 related, cell cycle regulator 		ENST00000291900 (ZER1-001) 128729786-128771893 protein_coding
ENST00000414921 (ZER1-003) 128753416-128771941 protein_coding
ENST00000427848 (ZER1-002) 128753815-128772414 protein_coding
ENST00000494461 (ZER1-004) 128753318-128771688 processed_transcript
ENSG00000203286 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000366116 (Metazoa_SRP.1-203) 128745857-128746138 misc_RNA
ENSG00000223478 (RP11-545E17.3)
 ENST00000443631 (RP11-545E17.3-001) 128724445-128733194 antisense
CIL_0006W4_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039686-ENSMUSG00000039678 CGP 10090 2:30097283-30152013
GeneTranscriptPositionBiotype
ENSMUSG00000039678 (Tbc1d13)
TBC1 domain family, member 13 		ENSMUST00000044556 (Tbc1d13-001) 30133746-30152013 protein_coding
ENSMUST00000125142 (Tbc1d13-005) 30133791-30137179 processed_transcript
ENSMUST00000129789 (Tbc1d13-007) 30137030-30142524 processed_transcript
ENSMUST00000131261 (Tbc1d13-003) 30133806-30136676 nonsense_mediated_decay
ENSMUST00000132324 (Tbc1d13-008) 30142279-30147078 retained_intron
ENSMUST00000134013 (Tbc1d13-006) 30133821-30137513 processed_transcript
ENSMUST00000136183 (Tbc1d13-002) 30133746-30137296 nonsense_mediated_decay
ENSMUST00000150879 (Tbc1d13-004) 30133772-30135152 retained_intron
ENSMUSG00000039686 (Zer1)
zyg-11 related, cell cycle regulator 		ENSMUST00000044751 (Zer1-002) 30097283-30124454 protein_coding
ENSMUST00000113677 (Zer1-001) 30097283-30124582 protein_coding
ENSMUST00000131858 (Zer1-007) 30107177-30107642 processed_transcript
ENSMUST00000133354 (Zer1-004) 30105569-30124579 retained_intron
ENSMUST00000139128 (Zer1-005) 30106800-30110773 retained_intron
ENSMUST00000149818 (Zer1-006) 30107515-30108542 retained_intron
ENSMUST00000152068 (Zer1-008) 30100458-30102741 retained_intron
ENSMUST00000152285 (Zer1-009) 30099802-30101772 retained_intron
ENSMUST00000154231 (Zer1-003) 30105308-30124585 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006W4_0001ENSG00000107021ENST00000223865ENST00000372648ENST00000466056ENST00000475097ENSG00000160445ENST00000291900ENST00000414921ENST00000427848ENST00000494461ENSG00000203286ENST00000366116ENSG00000223478ENST00000443631CIL_0006W4_0002ENSMUSG00000039678ENSMUST00000044556ENSMUST00000125142ENSMUST00000129789ENSMUST00000131261ENSMUST00000132324ENSMUST00000134013ENSMUST00000136183ENSMUST00000150879ENSMUSG00000039686ENSMUST00000044751ENSMUST00000113677ENSMUST00000131858ENSMUST00000133354ENSMUST00000139128ENSMUST00000149818ENSMUST00000152068ENSMUST00000152285ENSMUST00000154231
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006W4_0001ENSG00000107021ENST00000223865ENST00000372648ENST00000466056ENSG00000160445ENST00000291900ENST00000414921ENSG00000203286ENST00000366116ENSG00000223478ENST00000443631CIL_0006W4_0002ENSMUSG00000039678ENSMUST00000044556ENSMUSG00000039686ENSMUST00000044751ENSMUST00000113677ENSMUST00000154231
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107021 ENST00000223865 N/A N/A N/A N/A N/A 1.040±0.00 0.438±0.00 4.321±0.00 0.951±0.26 0.663±0.00 1.058±0.00 4.812±0.00 1.171±0.00 N/A
ENST00000372648 6.563±0.00 6.162±0.00 2.807±0.00 5.856±4.53 4.486±4.07 3.547±0.00 5.929±0.00 6.607±0.00 0.709±0.08 0.988±0.68 2.694±1.73 7.136±5.08 4.684±1.49 4.687±1.71
ENST00000466056 N/A N/A N/A N/A 0.918±0.00 0.573±0.00 N/A 1.535±0.00 0.692±0.00 N/A N/A 1.186±0.00 N/A N/A
ENST00000475097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000160445 ENST00000291900 8.756±0.00 4.687±0.00 1.965±0.00 4.153±0.00 11.635±0.00 3.765±1.97 6.190±5.80 1.420±0.21 0.592±0.28 3.166±2.36 17.865±0.00 6.427±5.26 10.868±2.86 22.359±9.29
ENST00000414921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.311±0.00 N/A N/A N/A
ENST00000427848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000203286 ENST00000366116 0.312±0.00 3.103±0.00 N/A 1.314±0.00 1.039±0.00 0.822±0.00 0.919±0.00 1.638±0.00 0.118±0.00 0.323±0.00 0.234±0.00 0.802±0.64 0.445±0.15 0.881±0.03
ENSG00000223478 ENST00000443631 1.253±0.00 2.192±0.00 N/A 1.405±0.00 2.000±0.00 0.928±0.00 0.413±0.00 2.119±0.00 0.834±0.04 0.732±0.00 0.172±0.00 1.197±0.30 3.956±0.75 1.475±0.15
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039678 ENSMUST00000044556 20.631±2.15 17.485±12.01 9.564±1.76 17.276±6.10 17.939±10.89 15.618±12.40 7.121±0.55 41.761±19.56 10.243±4.18 19.646±4.61 1.667±0.90 17.449±10.77 14.544±6.78 6.993±3.46
ENSMUST00000125142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134013 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000039686 ENSMUST00000044751 N/A N/A N/A 48.173±0.00 N/A N/A N/A N/A N/A N/A N/A 10.335±0.00 3.968±0.00 4.799±0.00
ENSMUST00000113677 21.846±3.04 32.737±4.78 18.231±1.51 25.187±0.13 22.626±6.00 15.425±3.02 12.444±3.47 15.575±2.21 7.802±2.46 20.676±2.70 10.204±0.76 26.436±11.25 4.860±2.23 21.733±10.31
ENSMUST00000131858 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133354 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139128 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152285 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154231 N/A N/A N/A 5.083±0.92 N/A N/A N/A N/A 0.978±0.00 N/A N/A 1.815±0.00 1.223±0.70 N/A

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