C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TBC1 domain family, member 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000107021 TBC1D13 9606 + 9:128787204-128810432 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000223865 TBC1D13-001 128787349-128810424 protein_coding
  ENST00000372648 TBC1D13-002 128787204-128810432 protein_coding
  ENST00000466056 TBC1D13-003 128787333-128803448 processed_transcript
  ENST00000475097 TBC1D13-004 128787270-128797130 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000223865ENST00000372648ENST00000466056
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000223865 N/A N/A N/A N/A N/A 1.040±0.00 0.438±0.00 4.321±0.00 0.951±0.26 0.663±0.00 1.058±0.00 4.812±0.00 1.171±0.00 N/A
ENST00000372648 6.563±0.00 6.162±0.00 2.807±0.00 5.856±4.53 4.486±4.07 3.547±0.00 5.929±0.00 6.607±0.00 0.709±0.08 0.988±0.68 2.694±1.73 7.136±5.08 4.684±1.49 4.687±1.71
ENST00000466056 N/A N/A N/A N/A 0.918±0.00 0.573±0.00 N/A 1.535±0.00 0.692±0.00 N/A N/A 1.186±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006W4 CIL_0006W4_0001 CGP 9:128729786-128810432
CIL_0005L7 CIL_0005L7_0001 CGP 9:128787204-128822677

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0005515 IEA protein binding
GO:0032313 IEA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078274 TBC1 domain family, member 13 protein_coding Danio_rerio
ENSMUSG00000039678 Tbc1d13 TBC1 domain family, member 13 protein_coding Mus_musculus

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