C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LIM domain binding 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039706 Ldb2 10090 - 5:44472133-44799707 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000070748 Ldb2-201 44472133-44799707 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000070748
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000070748 7.450±4.69 7.486±1.09 2.929±0.50 6.297±3.58 7.113±1.75 2.335±0.94 2.194±0.92 7.328±2.91 1.165±0.30 37.482±3.17 0.663±0.26 6.083±3.53 0.993±0.39 0.222±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033W CIL_00033W_0004 CGP 5:44175164-44799707

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000989 IPI transcription factor binding transcription factor activity
GO:0001942 IGI hair follicle development
GO:0003712 IEA transcription cofactor activity
GO:0005515 IPI protein binding
GO:0005634 ISS nucleus
GO:0005667 IDA transcription factor complex
GO:0010669 IGI epithelial structure maintenance
GO:0019899 IPI enzyme binding
GO:0030274 ISS LIM domain binding
GO:0035019 IGI somatic stem cell maintenance
GO:0044089 IGI positive regulation of cellular component biogenesis
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019579 ldb2a LIM-domain binding factor 2a protein_coding Danio_rerio
ENSDARG00000034896 ldb2b LIM-domain binding factor 2b protein_coding Danio_rerio
ENSG00000169744 LDB2 LIM domain binding 2 protein_coding Homo_sapiens

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