Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	gamma-aminobutyric acid (GABA) B receptor, 2
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSMUSG00000039809	Gabbr2	10090	-	4:46662318-46991873	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENSMUST00000107749		Gabbr2-001	46662318-46991873	protein_coding
	ENSMUST00000129328		Gabbr2-002	46681131-46684494	processed_transcript

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000107749	0.051±0.02	0.043±0.03	0.018±0.00	22.558±22.77	0.033±0.01	0.034±0.02	0.025±0.01	0.047±0.02	1.538±1.53	0.014±0.01	0.013±0.00	0.068±0.02	0.085±0.06	0.153±0.10
ENSMUST00000129328	N/A	0.179±0.00	N/A	N/A	N/A	N/A	N/A	0.261±0.07	0.159±0.00	N/A	N/A	0.351±0.02	N/A	N/A

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_000853	CIL_000853_0002	VISTA	4:46066953-46671362
CIL_0009AR	CIL_0009AR_0002	VISTA	4:46066953-46668597
CIL_00029Z	CIL_00029Z_0002	CGP	4:46604390-46991873
CIL_000202	CIL_000202_0002	CGP	4:46662318-47057306

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0004965	IEA	G-protein coupled GABA receptor activity
GO:0005515	IPI	protein binding
GO:0005737	IDA	cytoplasm
GO:0005887	ISS	integral component of plasma membrane
GO:0007214	ISS	gamma-aminobutyric acid signaling pathway
GO:0030054	IEA	cell junction
GO:0038039	ISS	G-protein coupled receptor heterodimeric complex
GO:0043005	IDA	neuron projection
GO:0045211	IEA	postsynaptic membrane

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000061042	gabbr2	gamma-aminobutyric acid (GABA) B receptor, 2	protein_coding	Danio_rerio
ENSG00000136928	GABBR2	gamma-aminobutyric acid (GABA) B receptor, 2	protein_coding	Homo_sapiens

Loading