C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000202_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136928-ENSG00000165138 CGP 9606 9:98288109-98796965
GeneTranscriptPositionBiotype
ENSG00000136928 (GABBR2)
gamma-aminobutyric acid (GABA) B receptor, 2 		ENST00000259455 (GABBR2-001) 98288109-98709197 protein_coding
ENST00000477471 (GABBR2-002) 98473230-98555898 processed_transcript
ENSG00000165138 (ANKS6)
ankyrin repeat and sterile alpha motif domain containing 6 		ENST00000353234 (ANKS6-006) 98732019-98796539 protein_coding
ENST00000375019 (ANKS6-002) 98731996-98796965 protein_coding
ENST00000444472 (ANKS6-001) 98731329-98777426 protein_coding
ENST00000466120 (ANKS6-004) 98783950-98790496 processed_transcript
ENST00000471846 (ANKS6-007) 98789911-98796539 processed_transcript
ENST00000486778 (ANKS6-005) 98783570-98784468 processed_transcript
ENSG00000229897 (SEPT7P7)
septin 7 pseudogene 7 		ENST00000420492 (SEPT7P7-001) 98606833-98608133 processed_pseudogene
CIL_000202_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039809-ENSMUSG00000066191 CGP 10090 4:46662318-47057306
GeneTranscriptPositionBiotype
ENSMUSG00000039809 (Gabbr2)
gamma-aminobutyric acid (GABA) B receptor, 2 		ENSMUST00000107749 (Gabbr2-001) 46662318-46991873 protein_coding
ENSMUST00000129328 (Gabbr2-002) 46681131-46684494 processed_transcript
ENSMUSG00000048824 (Gm568)
predicted gene 568 		ENSMUST00000135777 (Gm568-001) 47008316-47010781 lincRNA
ENSMUSG00000066191 (Anks6)
ankyrin repeat and sterile alpha motif domain containing 6 		ENSMUST00000084616 (Anks6-201) 47015689-47057306 protein_coding
ENSMUST00000107747 (Anks6-001) 47015669-47057306 protein_coding
ENSMUST00000152479 (Anks6-002) 47017000-47025710 processed_transcript
ENSMUST00000154664 (Anks6-003) 47038425-47040143 processed_transcript
ENSMUSG00000081561 (Gm12425)
predicted gene 12425 		ENSMUST00000119580 (Gm12425-001) 47041598-47041960 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000202_0001ENSG00000136928ENST00000259455ENST00000477471ENSG00000165138ENST00000353234ENST00000375019ENST00000444472ENST00000466120ENST00000471846ENST00000486778ENSG00000229897ENST00000420492CIL_000202_0002ENSMUSG00000039809ENSMUST00000107749ENSMUST00000129328ENSMUSG00000048824ENSMUST00000135777ENSMUSG00000066191ENSMUST00000084616ENSMUST00000107747ENSMUST00000152479ENSMUST00000154664ENSMUSG00000081561ENSMUST00000119580
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000202_0001ENSG00000136928ENST00000259455ENST00000477471ENSG00000165138ENST00000353234ENST00000375019ENST00000444472ENST00000471846ENSG00000229897ENST00000420492CIL_000202_0002ENSMUSG00000039809ENSMUST00000107749ENSMUST00000129328ENSMUSG00000048824ENSMUST00000135777ENSMUSG00000066191ENSMUST00000084616ENSMUST00000107747ENSMUST00000152479ENSMUST00000154664ENSMUSG00000081561ENSMUST00000119580
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136928 ENST00000259455 0.684±0.00 0.013±0.00 N/A 15.127±10.00 0.017±0.00 0.015±0.00 0.203±0.19 0.019±0.00 0.045±0.03 0.031±0.00 0.014±0.00 0.023±0.02 0.060±0.03 0.179±0.00
ENST00000477471 N/A N/A N/A N/A N/A N/A N/A 0.059±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000165138 ENST00000353234 1.496±0.00 2.636±0.00 0.408±0.00 0.886±0.00 1.179±0.77 1.158±0.22 0.550±0.00 3.210±0.00 0.557±0.17 1.222±0.00 0.260±0.02 4.190±0.73 1.011±0.45 2.199±0.53
ENST00000375019 N/A N/A N/A 1.181±0.85 1.473±0.00 3.095±0.00 N/A N/A N/A 2.024±0.00 0.536±0.00 4.589±0.72 1.043±0.07 2.447±0.00
ENST00000444472 1.361±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.314±0.00 2.691±0.00 7.010±0.00
ENST00000466120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.339±0.00 N/A N/A N/A
ENST00000486778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000229897 ENST00000420492 N/A 0.017±0.00 N/A 0.172±0.03 N/A 0.015±0.00 0.048±0.00 0.017±0.00 N/A N/A N/A 0.010±0.00 N/A 0.010±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039809 ENSMUST00000107749 0.051±0.02 0.043±0.03 0.018±0.00 22.558±22.77 0.033±0.01 0.034±0.02 0.025±0.01 0.047±0.02 1.538±1.53 0.014±0.01 0.013±0.00 0.068±0.02 0.085±0.06 0.153±0.10
ENSMUST00000129328 N/A 0.179±0.00 N/A N/A N/A N/A N/A 0.261±0.07 0.159±0.00 N/A N/A 0.351±0.02 N/A N/A
ENSMUSG00000048824 ENSMUST00000135777 0.286±0.03 N/A 0.021±0.00 0.083±0.00 0.333±0.09 0.141±0.00 0.153±0.00 0.228±0.15 0.054±0.01 0.149±0.07 N/A 0.123±0.00 N/A 9.790±3.71
ENSMUSG00000066191 ENSMUST00000084616 N/A N/A 0.669±0.07 1.198±0.00 0.346±0.13 0.648±0.00 0.241±0.00 1.255±0.20 0.061±0.03 0.336±0.05 0.223±0.09 0.837±0.50 0.108±0.00 0.294±0.00
ENSMUST00000107747 0.503±0.00 0.368±0.04 0.447±0.02 2.243±0.63 0.517±0.00 N/A 0.290±0.03 1.063±0.23 0.078±0.00 0.391±0.09 0.234±0.07 N/A 0.337±0.06 0.649±0.52
ENSMUST00000152479 N/A N/A N/A N/A 1.135±0.00 N/A N/A N/A N/A N/A N/A N/A 0.509±0.06 N/A
ENSMUST00000154664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.236±0.00 N/A N/A N/A
ENSMUSG00000081561 ENSMUST00000119580 N/A N/A N/A 0.038±0.00 N/A 0.440±0.00 0.165±0.00 0.350±0.00 N/A N/A N/A 0.380±0.00 0.092±0.09 N/A

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