C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000202_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000136928-ENSG00000165138 CGP 9606 9:98288109-98796965
GeneTranscriptPositionBiotype
ENSG00000136928 (GABBR2)
gamma-aminobutyric acid (GABA) B receptor, 2 		ENST00000259455 (GABBR2-001) 98288109-98709197 protein_coding
ENST00000477471 (GABBR2-002) 98473230-98555898 processed_transcript
ENSG00000165138 (ANKS6)
ankyrin repeat and sterile alpha motif domain containing 6 		ENST00000353234 (ANKS6-006) 98732019-98796539 protein_coding
ENST00000375019 (ANKS6-002) 98731996-98796965 protein_coding
ENST00000444472 (ANKS6-001) 98731329-98777426 protein_coding
ENST00000466120 (ANKS6-004) 98783950-98790496 processed_transcript
ENST00000471846 (ANKS6-007) 98789911-98796539 processed_transcript
ENST00000486778 (ANKS6-005) 98783570-98784468 processed_transcript
ENSG00000229897 (SEPT7P7)
septin 7 pseudogene 7 		ENST00000420492 (SEPT7P7-001) 98606833-98608133 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_000202_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039809-ENSMUSG00000066191 CGP 10090 4:46662318-47057306
GeneTranscriptPositionBiotype
ENSMUSG00000039809 (Gabbr2)
gamma-aminobutyric acid (GABA) B receptor, 2 		ENSMUST00000107749 (Gabbr2-001) 46662318-46991873 protein_coding
ENSMUST00000129328 (Gabbr2-002) 46681131-46684494 processed_transcript
ENSMUSG00000048824 (Gm568)
predicted gene 568 		ENSMUST00000135777 (Gm568-001) 47008316-47010781 lincRNA
ENSMUSG00000066191 (Anks6)
ankyrin repeat and sterile alpha motif domain containing 6 		ENSMUST00000084616 (Anks6-201) 47015689-47057306 protein_coding
ENSMUST00000107747 (Anks6-001) 47015669-47057306 protein_coding
ENSMUST00000152479 (Anks6-002) 47017000-47025710 processed_transcript
ENSMUST00000154664 (Anks6-003) 47038425-47040143 processed_transcript
ENSMUSG00000081561 (Gm12425)
predicted gene 12425 		ENSMUST00000119580 (Gm12425-001) 47041598-47041960 processed_pseudogene

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000202_0001ENSG00000136928ENST00000259455ENST00000477471ENSG00000165138ENST00000353234ENST00000375019ENST00000444472ENST00000466120ENST00000471846ENST00000486778ENSG00000229897ENST00000420492CIL_000202_0002ENSMUSG00000039809ENSMUST00000107749ENSMUST00000129328ENSMUSG00000048824ENSMUST00000135777ENSMUSG00000066191ENSMUST00000084616ENSMUST00000107747ENSMUST00000152479ENSMUST00000154664ENSMUSG00000081561ENSMUST00000119580
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000202_0001ENSG00000136928ENST00000259455ENST00000477471ENSG00000165138ENST00000353234ENST00000375019ENST00000444472ENST00000471846ENSG00000229897ENST00000420492CIL_000202_0002ENSMUSG00000039809ENSMUST00000107749ENSMUST00000129328ENSMUSG00000048824ENSMUST00000135777ENSMUSG00000066191ENSMUST00000084616ENSMUST00000107747ENSMUST00000152479ENSMUST00000154664ENSMUSG00000081561ENSMUST00000119580
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136928 ENST00000259455 0.684±0.00 0.013±0.00 N/A 15.127±10.00 0.017±0.00 0.015±0.00 0.203±0.19 0.019±0.00 0.045±0.03 0.031±0.00 0.014±0.00 0.023±0.02 0.060±0.03 0.179±0.00
ENST00000477471 N/A N/A N/A N/A N/A N/A N/A 0.059±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000165138 ENST00000353234 1.496±0.00 2.636±0.00 0.408±0.00 0.886±0.00 1.179±0.77 1.158±0.22 0.550±0.00 3.210±0.00 0.557±0.17 1.222±0.00 0.260±0.02 4.190±0.73 1.011±0.45 2.199±0.53
ENST00000375019 N/A N/A N/A 1.181±0.85 1.473±0.00 3.095±0.00 N/A N/A N/A 2.024±0.00 0.536±0.00 4.589±0.72 1.043±0.07 2.447±0.00
ENST00000444472 1.361±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.314±0.00 2.691±0.00 7.010±0.00
ENST00000466120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.339±0.00 N/A N/A N/A
ENST00000486778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000229897 ENST00000420492 N/A 0.017±0.00 N/A 0.172±0.03 N/A 0.015±0.00 0.048±0.00 0.017±0.00 N/A N/A N/A 0.010±0.00 N/A 0.010±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000039809 ENSMUST00000107749 0.051±0.02 0.043±0.03 0.018±0.00 22.558±22.77 0.033±0.01 0.034±0.02 0.025±0.01 0.047±0.02 1.538±1.53 0.014±0.01 0.013±0.00 0.068±0.02 0.085±0.06 0.153±0.10
ENSMUST00000129328 N/A 0.179±0.00 N/A N/A N/A N/A N/A 0.261±0.07 0.159±0.00 N/A N/A 0.351±0.02 N/A N/A
ENSMUSG00000048824 ENSMUST00000135777 0.286±0.03 N/A 0.021±0.00 0.083±0.00 0.333±0.09 0.141±0.00 0.153±0.00 0.228±0.15 0.054±0.01 0.149±0.07 N/A 0.123±0.00 N/A 9.790±3.71
ENSMUSG00000066191 ENSMUST00000084616 N/A N/A 0.669±0.07 1.198±0.00 0.346±0.13 0.648±0.00 0.241±0.00 1.255±0.20 0.061±0.03 0.336±0.05 0.223±0.09 0.837±0.50 0.108±0.00 0.294±0.00
ENSMUST00000107747 0.503±0.00 0.368±0.04 0.447±0.02 2.243±0.63 0.517±0.00 N/A 0.290±0.03 1.063±0.23 0.078±0.00 0.391±0.09 0.234±0.07 N/A 0.337±0.06 0.649±0.52
ENSMUST00000152479 N/A N/A N/A N/A 1.135±0.00 N/A N/A N/A N/A N/A N/A N/A 0.509±0.06 N/A
ENSMUST00000154664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.236±0.00 N/A N/A N/A
ENSMUSG00000081561 ENSMUST00000119580 N/A N/A N/A 0.038±0.00 N/A 0.440±0.00 0.165±0.00 0.350±0.00 N/A N/A N/A 0.380±0.00 0.092±0.09 N/A

Loading