C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat containing 17
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039883 Lrrc17 10090 + 5:21543527-21575900 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035651 Lrrc17-201 21543527-21575900 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035651
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035651 19.189±13.30 0.807±0.15 9.375±0.62 306.775±428.81 11.587±0.65 2.870±0.43 1.687±0.10 0.696±0.11 0.607±0.59 3.220±0.31 0.771±0.29 15.636±3.30 9.548±11.24 7.904±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y6 CIL_0007Y6_0002 VISTA 5:21195900-21797355
CIL_0005CF CIL_0005CF_0002 CGP 5:21424958-21645605
CIL_0005CK CIL_0005CK_0002 CGP 5:21483847-21645605
CIL_0005CL CIL_0005CL_0002 CGP 5:21543527-21662694

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005615 IDA extracellular space
GO:0045671 IDA negative regulation of osteoclast differentiation
GO:0048539 IDA bone marrow development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037960 lrrc17 leucine rich repeat containing 17 protein_coding Danio_rerio
ENSG00000128606 LRRC17 leucine rich repeat containing 17 protein_coding Homo_sapiens

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