C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 120A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039886 Tmem120a 10090 - 5:135735485-135744271 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000043378 Tmem120a-001 135735485-135744271 protein_coding
  ENSMUST00000127156 Tmem120a-003 135736255-135742399 retained_intron
  ENSMUST00000141779 Tmem120a-004 135735504-135736590 retained_intron
  ENSMUST00000153399 Tmem120a-002 135737208-135744208 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043378ENSMUST00000127156ENSMUST00000141779
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043378 106.339±48.90 42.339±15.04 12.058±0.92 11.671±3.66 59.463±26.89 23.311±2.37 7.288±1.26 40.635±2.31 17.220±10.88 12.447±3.58 4.631±0.90 24.924±7.34 47.955±11.47 64.601±24.76
ENSMUST00000127156 N/A N/A N/A 3.208±0.00 N/A N/A N/A N/A N/A N/A N/A 11.264±4.16 13.599±2.57 N/A
ENSMUST00000141779 N/A N/A N/A N/A N/A N/A 3.108±0.00 N/A 6.394±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NS CIL_0006NS_0002 CGP 5:135670033-135744271
CIL_0006NR CIL_0006NR_0002 CGP 5:135735485-135778385

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030914 tmem120a transmembrane protein 120A protein_coding Danio_rerio
ENSDARG00000042379 TMEM120A (2 of 2) transmembrane protein 120A protein_coding Danio_rerio
ENSG00000189077 TMEM120A transmembrane protein 120A protein_coding Homo_sapiens

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