C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 120A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043378 Tmem120a-001 ENSMUSG00000039886 10090 - 5:135735485-135744271 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043378
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043378 106.339±48.90 42.339±15.04 12.058±0.92 11.671±3.66 59.463±26.89 23.311±2.37 7.288±1.26 40.635±2.31 17.220±10.88 12.447±3.58 4.631±0.90 24.924±7.34 47.955±11.47 64.601±24.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NS CIL_0006NS_0002 CGP 5:135670033-135744271
CIL_0006NR CIL_0006NR_0002 CGP 5:135735485-135778385

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000417509 TMEM120A-003 protein_coding Homo_sapiens 0 684
ENST00000431867 TMEM120A-006 processed_transcript Homo_sapiens 0 662
ENST00000439537 TMEM120A-004 protein_coding Homo_sapiens 0 1074
ENST00000440632 TMEM120A-002 nonsense_mediated_decay Homo_sapiens 0 693
ENST00000465494 TMEM120A-010 retained_intron Homo_sapiens 0 623
ENST00000480538 TMEM120A-009 retained_intron Homo_sapiens 0 566
ENST00000480899 TMEM120A-012 protein_coding Homo_sapiens 0 676
ENST00000485200 TMEM120A-005 protein_coding Homo_sapiens 0 355
ENST00000486865 TMEM120A-011 retained_intron Homo_sapiens 0 257
ENST00000490656 TMEM120A-015 nonsense_mediated_decay Homo_sapiens 0 339
ENST00000493111 TMEM120A-001 protein_coding Homo_sapiens 0 1227

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