C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 120A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000189077 TMEM120A 9606 - 7:75986837-75994659 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000417509 TMEM120A-003 75986983-75994616 protein_coding
  ENST00000431867 TMEM120A-006 75987542-75994556 processed_transcript
  ENST00000439537 TMEM120A-004 75986985-75994574 protein_coding
  ENST00000440632 TMEM120A-002 75987041-75994656 nonsense_mediated_decay
  ENST00000460127 TMEM120A-017 75986992-75987535 retained_intron
  ENST00000465494 TMEM120A-010 75987927-75992282 retained_intron
  ENST00000465989 TMEM120A-014 75987442-75987978 retained_intron
  ENST00000480538 TMEM120A-009 75988036-75992527 retained_intron
  ENST00000480899 TMEM120A-012 75987150-75989178 protein_coding
  ENST00000484946 TMEM120A-016 75986985-75987668 retained_intron
  ENST00000485200 TMEM120A-005 75988130-75994638 protein_coding
  ENST00000486865 TMEM120A-011 75988203-75988587 retained_intron
  ENST00000490656 TMEM120A-015 75986985-75988320 nonsense_mediated_decay
  ENST00000493111 TMEM120A-001 75986837-75994659 protein_coding
  ENST00000493251 TMEM120A-013 75986989-75988211 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverMuscleOvaryPlacentaTestisENST00000439537ENST00000440632ENST00000465494ENST00000485200ENST00000493111
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENST00000439537 18.844±0.00 17.949±0.00 N/A N/A 20.332±0.00 9.883±0.00 23.656±0.00 3.117±0.00 23.488±0.00 N/A N/A 25.366±0.00
ENST00000440632 14.010±0.00 14.833±0.00 N/A 9.200±0.00 16.680±0.00 N/A 14.169±0.00 N/A 19.417±0.00 64.123±0.00 14.666±0.00 54.688±23.65
ENST00000465494 N/A N/A N/A N/A N/A N/A N/A N/A 32.934±0.00 N/A N/A N/A
ENST00000485200 N/A N/A 3.546±0.00 N/A N/A N/A 6.339±0.00 N/A 10.352±0.00 N/A N/A N/A
ENST00000493111 N/A N/A N/A N/A N/A N/A N/A N/A 5.592±0.00 33.982±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006NP CIL_0006NP_0001 CGP 7:75842602-75986855
CIL_0006NS CIL_0006NS_0001 CGP 7:75899200-75994659
CIL_0006NR CIL_0006NR_0001 CGP 7:75986837-76048004

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000030914 tmem120a transmembrane protein 120A protein_coding Danio_rerio
ENSDARG00000042379 TMEM120A (2 of 2) transmembrane protein 120A protein_coding Danio_rerio
ENSMUSG00000039886 Tmem120a transmembrane protein 120A protein_coding Mus_musculus

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