C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: BCL6 interacting corepressor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040363 Bcor 10090 - X:12036740-12160355 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000043441 Bcor-005 12036743-12160355 protein_coding
  ENSMUST00000065143 Bcor-003 12036740-12080553 protein_coding
  ENSMUST00000115512 Bcor-002 12036740-12080553 protein_coding
  ENSMUST00000115513 Bcor-001 12036740-12080553 protein_coding
  ENSMUST00000123004 Bcor-007 12059071-12128350 protein_coding
  ENSMUST00000124033 Bcor-004 12036740-12080553 protein_coding
  ENSMUST00000145872 Bcor-006 12058981-12128400 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043441ENSMUST00000065143ENSMUST00000115512ENSMUST00000115513ENSMUST00000123004ENSMUST00000124033
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043441 1.705±0.82 0.878±0.10 0.988±0.50 1.509±0.23 1.796±0.66 2.044±0.51 1.272±0.49 1.440±0.19 1.183±0.23 2.180±0.71 1.389±0.37 1.870±0.81 5.727±2.43 0.133±0.04
ENSMUST00000065143 0.250±0.00 1.283±0.23 0.454±0.07 1.184±0.50 1.655±0.08 1.713±1.05 0.790±0.00 0.429±0.06 0.797±0.40 0.853±0.05 1.252±0.61 1.424±0.56 1.232±0.47 0.112±0.05
ENSMUST00000115512 N/A 1.214±0.00 N/A N/A 0.387±0.00 0.954±0.20 0.278±0.00 0.390±0.10 0.317±0.12 N/A 1.034±0.00 1.039±0.39 N/A 0.067±0.00
ENSMUST00000115513 1.442±0.84 1.119±0.00 0.541±0.00 N/A 1.410±0.82 1.361±0.35 0.525±0.06 0.519±0.18 0.581±0.15 1.884±0.36 0.915±0.59 1.166±0.55 2.787±1.36 0.109±0.01
ENSMUST00000123004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.003±0.00
ENSMUST00000124033 N/A 1.231±0.78 N/A N/A N/A 1.119±0.52 N/A 0.513±0.13 0.534±0.21 N/A 0.674±0.00 1.260±0.50 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005QF CIL_0005QF_0002 CGP X:12036740-12617049

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0000415 IEA negative regulation of histone H3-K36 methylation
GO:0003714 IPI transcription corepressor activity
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007507 IEA heart development
GO:0008134 IEA transcription factor binding
GO:0030502 IEA negative regulation of bone mineralization
GO:0031072 IEA heat shock protein binding
GO:0031519 IEA PcG protein complex
GO:0035518 IEA histone H2A monoubiquitination
GO:0042476 IEA odontogenesis
GO:0042826 IEA histone deacetylase binding
GO:0044212 IEA transcription regulatory region DNA binding
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0051572 IEA negative regulation of histone H3-K4 methylation
GO:0060021 IEA palate development
GO:0065001 IEA specification of axis polarity
GO:0070171 IEA negative regulation of tooth mineralization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017798 bcor BCL6 co-repressor protein_coding Danio_rerio
ENSG00000183337 BCOR BCL6 corepressor protein_coding Homo_sapiens

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