C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BCL6 interacting corepressor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000065143 Bcor-003 ENSMUSG00000040363 10090 - X:12036740-12080553 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000065143
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000065143 0.250±0.00 1.283±0.23 0.454±0.07 1.184±0.50 1.655±0.08 1.713±1.05 0.790±0.00 0.429±0.06 0.797±0.40 0.853±0.05 1.252±0.61 1.424±0.56 1.232±0.47 0.112±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005QF CIL_0005QF_0002 CGP X:12036740-12617049

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003714 IPI transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342274 BCOR-201 protein_coding Homo_sapiens 0 6979
ENST00000378444 BCOR-003 protein_coding Homo_sapiens 0 4139
ENST00000378455 BCOR-004 protein_coding Homo_sapiens 0 3463
ENST00000378463 BCOR-008 protein_coding Homo_sapiens 0 2158
ENST00000397354 BCOR-007 protein_coding Homo_sapiens 0 7097
ENST00000406200 BCOR-006 protein_coding Homo_sapiens 0 4503
ENST00000412952 BCOR-005 protein_coding Homo_sapiens 9.99967e-42 172
ENST00000413905 BCOR-001 protein_coding Homo_sapiens 0 2015
ENST00000427012 BCOR-002 protein_coding Homo_sapiens 0 1323
ENST00000442018 BCOR-010 protein_coding Homo_sapiens 0 1327
ENST00000490976 BCOR-009 retained_intron Homo_sapiens 0 3417
ENST00000615339 BCOR-202 protein_coding Homo_sapiens 0 1206

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