C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BCL6 interacting corepressor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043441 Bcor-005 ENSMUSG00000040363 10090 - X:12036743-12160355 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043441
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043441 1.705±0.82 0.878±0.10 0.988±0.50 1.509±0.23 1.796±0.66 2.044±0.51 1.272±0.49 1.440±0.19 1.183±0.23 2.180±0.71 1.389±0.37 1.870±0.81 5.727±2.43 0.133±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005QF CIL_0005QF_0002 CGP X:12036740-12617049

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0003714 IPI transcription corepressor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342274 BCOR-201 protein_coding Homo_sapiens 0 3489
ENST00000378444 BCOR-003 protein_coding Homo_sapiens 0 3421
ENST00000378455 BCOR-004 protein_coding Homo_sapiens 0 6944
ENST00000378463 BCOR-008 protein_coding Homo_sapiens 0 2158
ENST00000397354 BCOR-007 protein_coding Homo_sapiens 0 3459
ENST00000406200 BCOR-006 protein_coding Homo_sapiens 0 3489
ENST00000412952 BCOR-005 protein_coding Homo_sapiens 2e-40 169
ENST00000413905 BCOR-001 protein_coding Homo_sapiens 0 2015
ENST00000427012 BCOR-002 protein_coding Homo_sapiens 0 1323
ENST00000442018 BCOR-010 protein_coding Homo_sapiens 0 1323
ENST00000490976 BCOR-009 retained_intron Homo_sapiens 0 3417
ENST00000615339 BCOR-202 protein_coding Homo_sapiens 0 1208

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