C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LYR motif containing 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040370 Lyrm5 10090 + 6:145211134-145216939 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000039729 Lyrm5-002 145211156-145216939 protein_coding
  ENSMUST00000111719 Lyrm5-007 145211200-145215734 protein_coding
  ENSMUST00000111721 Lyrm5-008 145211186-145216539 protein_coding
  ENSMUST00000111723 Lyrm5-006 145211175-145215771 protein_coding
  ENSMUST00000111724 Lyrm5-003 145211175-145216539 protein_coding
  ENSMUST00000111725 Lyrm5-004 145211134-145215791 protein_coding
  ENSMUST00000111726 Lyrm5-001 145211156-145216539 protein_coding
  ENSMUST00000126007 Lyrm5-005 145211170-145214968 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000111721ENSMUST00000111724ENSMUST00000111725ENSMUST00000111726
Transcript ID Adipose Adrenal Bladder Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000111721 N/A N/A N/A 10.134±5.13 6.376±0.00 7.733±0.43 8.979±0.00 N/A N/A N/A N/A
ENSMUST00000111724 9.894±2.10 16.173±2.22 N/A 8.000±2.91 8.482±0.30 7.518±0.81 7.428±1.36 N/A N/A N/A 3.168±0.00
ENSMUST00000111725 N/A 6.638±1.07 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000111726 10.206±3.12 N/A 19.104±1.84 6.619±0.36 18.758±3.69 11.950±3.23 15.869±4.28 19.448±1.00 13.045±3.74 12.010±4.62 4.233±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XB CIL_0008XB_0002 VISTA 6:144644642-145246014
CIL_0004XD CIL_0004XD_0002 CGP 6:145174834-145216939
CIL_0006UC CIL_0006UC_0002 CGP 6:145211134-145250239

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045827 lyrm5b LYR motif containing 5b protein_coding Danio_rerio
ENSG00000205707 LYRM5 LYR motif containing 5 protein_coding Homo_sapiens

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