C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006UC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205707-ENSG00000133703 CGP 9606 12:25195216-25250936
GeneTranscriptPositionBiotype
ENSG00000133703 (KRAS)
Kirsten rat sarcoma viral oncogene homolog 		ENST00000256078 (KRAS-004) 25209431-25250803 protein_coding
ENST00000311936 (KRAS-001) 25204789-25250931 protein_coding
ENST00000556131 (KRAS-002) 25233819-25250929 protein_coding
ENST00000557334 (KRAS-003) 25209168-25250936 protein_coding
ENSG00000205707 (LYRM5)
LYR motif containing 5 		ENST00000381356 (LYRM5-201) 25195216-25205014 protein_coding
ENST00000553788 (LYRM5-006) 25195277-25209645 protein_coding
ENST00000554266 (LYRM5-004) 25195270-25204172 protein_coding
ENST00000555151 (LYRM5-010) 25195277-25196184 processed_transcript
ENST00000555711 (LYRM5-003) 25195261-25204683 protein_coding
ENST00000556198 (LYRM5-011) 25195553-25204147 protein_coding
ENST00000556351 (LYRM5-005) 25195272-25204666 protein_coding
ENST00000556402 (LYRM5-007) 25195277-25204732 protein_coding
ENST00000556885 (LYRM5-002) 25195265-25205015 protein_coding
ENST00000556927 (LYRM5-009) 25195272-25204670 protein_coding
ENST00000557540 (LYRM5-001) 25195216-25205135 protein_coding
ENSG00000274987 (RP11-295I5.3)
 ENST00000612734 (RP11-295I5.3-001) 25210652-25211233 antisense
CIL_0006UC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040370-ENSMUSG00000030265 CGP 10090 6:145211134-145250239
GeneTranscriptPositionBiotype
ENSMUSG00000030265 (Kras)
v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog 		ENSMUST00000032399 (Kras-001) 145216699-145250239 protein_coding
ENSMUST00000111710 (Kras-002) 145220245-145250177 protein_coding
ENSMUST00000123972 (Kras-005) 145219980-145230824 processed_transcript
ENSMUST00000149314 (Kras-004) 145220610-145225557 retained_intron
ENSMUST00000155145 (Kras-003) 145246704-145250202 protein_coding
ENSMUST00000156486 (Kras-006) 145220297-145250170 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006UC_0001ENSG00000133703ENST00000256078ENST00000311936ENST00000556131ENST00000557334ENSG00000205707ENST00000381356ENST00000553788ENST00000554266ENST00000555151ENST00000555711ENST00000556198ENST00000556351ENST00000556402ENST00000556885ENST00000556927ENST00000557540ENSG00000274987ENST00000612734CIL_0006UC_0002ENSMUSG00000030265ENSMUST00000032399ENSMUST00000111710ENSMUST00000123972ENSMUST00000149314ENSMUST00000155145ENSMUST00000156486
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006UC_0001ENSG00000133703ENST00000256078ENST00000311936ENSG00000205707ENST00000381356ENST00000556885ENSG00000274987ENST00000612734CIL_0006UC_0002ENSMUSG00000030265ENSMUST00000032399ENSMUST00000111710ENSMUST00000123972ENSMUST00000156486
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000133703 ENST00000256078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.564±0.00 N/A N/A
ENST00000311936 6.924±0.00 4.940±0.00 2.215±0.00 7.943±1.55 2.309±0.42 3.816±0.56 1.939±0.85 2.502±0.37 1.745±0.20 4.263±1.41 2.523±0.00 3.935±1.01 4.343±1.84 4.194±0.28
ENST00000556131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557334 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000205707 ENST00000381356 N/A N/A N/A 7.820±0.00 4.293±0.00 N/A 3.648±2.09 14.543±0.00 5.217±0.00 N/A N/A N/A N/A 15.411±0.00
ENST00000553788 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554266 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556402 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556885 N/A N/A 3.742±0.00 13.141±0.00 4.270±0.00 8.056±0.00 7.181±5.20 11.013±0.00 15.943±0.00 N/A 6.873±3.98 8.899±0.00 4.510±1.61 14.008±0.26
ENST00000556927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557540 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000274987 ENST00000612734 0.092±0.00 0.557±0.00 N/A 0.300±0.00 0.541±0.27 0.481±0.23 0.081±0.00 0.758±0.20 0.661±0.38 1.288±0.95 N/A 0.655±0.39 0.092±0.00 0.090±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030265 ENSMUST00000032399 6.327±1.53 2.835±0.65 10.489±1.14 26.116±1.57 5.634±1.35 15.831±5.66 5.290±0.93 6.565±1.34 10.361±4.95 16.339±2.74 3.491±0.45 7.759±1.51 12.115±6.15 2.900±1.11
ENSMUST00000111710 N/A N/A N/A 14.291±0.00 N/A N/A N/A N/A N/A N/A N/A 9.209±0.00 16.040±3.20 4.923±0.00
ENSMUST00000123972 N/A N/A N/A N/A 9.036±1.04 21.338±0.00 N/A N/A N/A 20.044±1.45 N/A 15.108±2.39 N/A 6.249±0.83
ENSMUST00000149314 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156486 N/A N/A N/A 18.888±0.00 N/A N/A N/A N/A N/A N/A N/A 10.819±0.00 16.293±0.33 8.263±0.00

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