C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mitochondrial transcription termination factor 1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000044746 Mterf1a-001 ENSMUSG00000040429 10090 - 5:3890581-3893933 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000044746
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000044746 0.305±0.00 1.122±0.61 0.503±0.03 0.262±0.03 0.096±0.01 0.169±0.00 1.436±0.81 0.156±0.06 0.837±0.45 1.004±0.49 0.655±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004SZ CIL_0004SZ_0003 CGP 5:3890581-4080209

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003690 ISS double-stranded DNA binding
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0006353 ISS DNA-templated transcription, termination
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006393 ISS termination of mitochondrial transcription
GO:0032392 ISS DNA geometric change

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000351870 MTERF1-003 protein_coding Homo_sapiens 0 961
ENST00000406735 MTERF1-004 protein_coding Homo_sapiens 0 961
ENST00000419292 MTERF1-002 protein_coding Homo_sapiens 0 961
ENST00000442961 MTERF1-008 protein_coding Homo_sapiens 0 324
ENST00000456229 MTERF1-007 protein_coding Homo_sapiens 0 329

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