C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cadherin 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040452 Cdh12 10090 + 15:21111452-21589533 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000075132 Cdh12-001 21111452-21589533 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonLiverLungMuscleOvaryPlacentaTestisENSMUST00000075132
Transcript ID Adipose Bladder Brain Colon Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075132 0.022±0.01 0.007±0.00 0.834±0.43 0.050±0.00 0.005±0.00 0.022±0.00 0.005±0.00 0.084±0.05 0.003±0.00 0.376±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XA CIL_0003XA_0003 CGP 15:21111452-23474418

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005886 IEA plasma membrane
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074386 CDH12 (1 of 2) cadherin 12, type 2 (N-cadherin 2) protein_coding Danio_rerio
ENSDARG00000078226 CDH12 (2 of 2) cadherin 12, type 2 (N-cadherin 2) protein_coding Danio_rerio
ENSG00000154162 CDH12 cadherin 12, type 2 (N-cadherin 2) protein_coding Homo_sapiens

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