C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0000HE_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000141485-ENSG00000132530 | CGP | 9606 | 17:6684713-6775647  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000132530  (XAF1)XIAP associated factor 1 |
ENST00000346752 (XAF1-002)
|
6755838-6773663 | protein_coding | |
|
ENST00000361842 (XAF1-001)
|
6755840-6775647 | protein_coding | ||
|
ENST00000571135 (XAF1-018)
|
6756077-6760479 | nonsense_mediated_decay | ||
|
ENST00000571217 (XAF1-005)
|
6756062-6774108 | nonsense_mediated_decay | ||
|
ENST00000571673 (XAF1-007)
|
6756079-6773169 | nonsense_mediated_decay | ||
|
ENST00000572107 (XAF1-010)
|
6756053-6758716 | processed_transcript | ||
|
ENST00000572495 (XAF1-009)
|
6757397-6758592 | retained_intron | ||
|
ENST00000572546 (XAF1-020)
|
6756046-6762193 | nonsense_mediated_decay | ||
|
ENST00000573518 (XAF1-012)
|
6761718-6770780 | retained_intron | ||
|
ENST00000573760 (XAF1-014)
|
6755447-6758632 | retained_intron | ||
|
ENST00000574394 (XAF1-016)
|
6755565-6760581 | protein_coding | ||
|
ENST00000574907 (XAF1-011)
|
6756067-6762206 | protein_coding | ||
|
ENST00000574962 (XAF1-006)
|
6756079-6773169 | nonsense_mediated_decay | ||
|
ENST00000575147 (XAF1-013)
|
6756067-6762025 | nonsense_mediated_decay | ||
|
ENST00000575267 (XAF1-019)
|
6756048-6758175 | processed_transcript | ||
|
ENST00000575369 (XAF1-003)
|
6755448-6771928 | nonsense_mediated_decay | ||
|
ENST00000576341 (XAF1-015)
|
6755451-6758329 | retained_intron | ||
|
ENST00000576459 (XAF1-017)
|
6756046-6759556 | processed_transcript | ||
|
ENST00000576724 (XAF1-021)
|
6756055-6770969 | nonsense_mediated_decay | ||
|
ENSG00000141485 (SLC13A5) solute carrier family 13 (sodium-dependent citrate transporter), member 5 |
ENST00000293800 (SLC13A5-004)
|
6684723-6713369 | protein_coding | |
|
ENST00000381074 (SLC13A5-003)
|
6686080-6713366 | protein_coding | ||
|
ENST00000433363 (SLC13A5-001)
|
6684713-6713567 | protein_coding | ||
|
ENST00000570687 (SLC13A5-012)
|
6687354-6690884 | protein_coding | ||
|
ENST00000572094 (SLC13A5-014)
|
6695817-6713359 | nonsense_mediated_decay | ||
|
ENST00000572352 (SLC13A5-013)
|
6703073-6713369 | protein_coding | ||
|
ENST00000572727 (SLC13A5-011)
|
6689962-6695889 | protein_coding | ||
|
ENST00000573648 (SLC13A5-002)
|
6686097-6713377 | protein_coding | ||
|
ENST00000574580 (SLC13A5-007)
|
6684723-6690082 | retained_intron | ||
|
ENST00000574824 (SLC13A5-005)
|
6695408-6705557 | retained_intron | ||
|
ENST00000575230 (SLC13A5-008)
|
6704036-6713369 | nonsense_mediated_decay | ||
|
ENST00000576323 (SLC13A5-010)
|
6703881-6713371 | protein_coding | ||
|
ENSG00000244283 (RPL23AP73) ribosomal protein L23a pseudogene 73 |
ENST00000492507 (RPL23AP73-001)
|
6749718-6750188 | processed_pseudogene | |
|
ENSG00000279296 (RP11-609D21.3) |
ENST00000624952 (RP11-609D21.3-001)
|
6772831-6776116 | TEC | |
| CIL_0000HE_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000020805-ENSMUSG00000040483 | CGP | 10090 | 11:72241994-72313733 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000020805 (Slc13a5) solute carrier family 13 (sodium-dependent citrate transporter), member 5 |
ENSMUST00000021161 (Slc13a5-001)
|
72241994-72266602 | protein_coding | |
|
ENSMUST00000137701 (Slc13a5-002)
|
72261637-72267222 | protein_coding | ||
|
ENSMUST00000140167 (Slc13a5-003)
|
72260332-72266602 | protein_coding | ||
|
ENSMUSG00000040483 (Xaf1) XIAP associated factor 1 |
ENSMUST00000094041 (Xaf1-003)
|
72301663-72308749 | nonsense_mediated_decay | |
|
ENSMUST00000140842 (Xaf1-005)
|
72301639-72312081 | protein_coding | ||
|
ENSMUST00000142921 (Xaf1-004)
|
72301665-72308768 | retained_intron | ||
|
ENSMUST00000146233 (Xaf1-001)
|
72301630-72313733 | protein_coding | ||
|
ENSMUST00000151440 (Xaf1-002)
|
72301629-72309061 | protein_coding | ||
|
ENSMUSG00000084599 (n-R5s70) nuclear encoded rRNA 5S 70 |
ENSMUST00000122650 (n-R5s70-201)
|
72281016-72281131 | rRNA | |
|
ENSMUSG00000086951 (1700051A21Rik) RIKEN cDNA 1700051A21 gene |
ENSMUST00000147937 (1700051A21Rik-001)
|
72266421-72268575 | processed_transcript | |
|
ENSMUST00000154739 (1700051A21Rik-002)
|
72266844-72268557 | processed_transcript | ||
Expression Patterns
|
